Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3567 |
Symbol | |
ID | 8359734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4446034 |
End bp | 4447221 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644965737 |
Product | hypothetical protein |
Protein accession | YP_003123231 |
Protein GI | 256422578 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0186066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0993584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATA TTCATCTTTT TTGTTCCATA ACAGTTTTTT GCCTGTTCAG TCTCACGACA AAGGCACAAC GGTTACCCAT TGTTAAAGCA GGCAATGCCA ATGCCGTTAT CACGGATGGT GCATATGTCC GTTTAAACTG GCAGCTTGAC CCTACGGCCA GACCAGACAT TTATTATGTC AATGTTCCAT CTAAACCAAG CCAGATCACA CTTAAAACCG ACCAGGATAG TATCCGTTTT CAAACTAAAC CCGGAAAGGC ATATGACTTT ATTGCCTTGT TGAATGGAAA AGACAGTTGC TTTATAAGAA TCGCATCCAT ACAGGATACC CTTACGCAGT TACGCGGTAG GAGTGTGCAT CCCACATCCG ATACACTACC GTTTGTATTA CATGGCTCGC GGATCTATCT GAAAGGTATT CTGAACAATA ATAAAACCGT CAATGTACAG TTTGACCTGG GCGCAGGTAC CACCTGCGTC AACCGGCAGG TAGCTGAAAA ATTAGGGTTG CAGTTTGATG GTAAAACAGT CGTCACTAAT ACACAAGGTA CCAATGAGAC GGGCACCAGC TCGGGCAATA CGCTTACGAT CGGTAATATC AGCTGGGAAG CAGTACGCCT GACACAGGTC GGAAATATGC AGGAAGGTGA AGACCTGATC ATTGGTAATT CCCTCTTTCG GGATAAGATC ATCGAGATTG ATTATGATAA TCTTCGGATG ATCATTCATC AAAAACTACC TGCTTACAGC CGTGCATTTA AGCGGCAGGC GGTTTGGTTT GAACAGAACA GACCGAAGTT TCAGGCCGTC GTTGTGGTGG GAGGGAAGTC TTATCCTTTC TGGTTTCTCT TTGACACCGG CAGGGATGCG ACCATGGCGC TGGGCAGTGA TTTTACGCGT CATGAACAAC TCTGGCAAAA GCTGGATAGT TTAACCATGG TCAATGGACG GAAGATCGTG CGGTTGAATG CGGAGATTGC GGGCGTCGTC TTTCCGGATA TCGTGACCAA TGCGCATCCT CCTGACAAGC CGGGTAGCAG AACGACCTTA TTCGGAAACC AGGTGTTGAA TCATTTTAAC CTGATCCTGG ATAACCGGGA GGGGATGCTT TACCTGAAAC CGAACAGTCG TAGTAAAGAA CCTTATTCTA ATTATAAAGA TTTTCTGGAG AGCATAAGAG GCAAGTAA
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Protein sequence | MSHIHLFCSI TVFCLFSLTT KAQRLPIVKA GNANAVITDG AYVRLNWQLD PTARPDIYYV NVPSKPSQIT LKTDQDSIRF QTKPGKAYDF IALLNGKDSC FIRIASIQDT LTQLRGRSVH PTSDTLPFVL HGSRIYLKGI LNNNKTVNVQ FDLGAGTTCV NRQVAEKLGL QFDGKTVVTN TQGTNETGTS SGNTLTIGNI SWEAVRLTQV GNMQEGEDLI IGNSLFRDKI IEIDYDNLRM IIHQKLPAYS RAFKRQAVWF EQNRPKFQAV VVVGGKSYPF WFLFDTGRDA TMALGSDFTR HEQLWQKLDS LTMVNGRKIV RLNAEIAGVV FPDIVTNAHP PDKPGSRTTL FGNQVLNHFN LILDNREGML YLKPNSRSKE PYSNYKDFLE SIRGK
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