Gene Cpin_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3567 
Symbol 
ID8359734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4446034 
End bp4447221 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content46% 
IMG OID644965737 
Producthypothetical protein 
Protein accessionYP_003123231 
Protein GI256422578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0186066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0993584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCATA TTCATCTTTT TTGTTCCATA ACAGTTTTTT GCCTGTTCAG TCTCACGACA 
AAGGCACAAC GGTTACCCAT TGTTAAAGCA GGCAATGCCA ATGCCGTTAT CACGGATGGT
GCATATGTCC GTTTAAACTG GCAGCTTGAC CCTACGGCCA GACCAGACAT TTATTATGTC
AATGTTCCAT CTAAACCAAG CCAGATCACA CTTAAAACCG ACCAGGATAG TATCCGTTTT
CAAACTAAAC CCGGAAAGGC ATATGACTTT ATTGCCTTGT TGAATGGAAA AGACAGTTGC
TTTATAAGAA TCGCATCCAT ACAGGATACC CTTACGCAGT TACGCGGTAG GAGTGTGCAT
CCCACATCCG ATACACTACC GTTTGTATTA CATGGCTCGC GGATCTATCT GAAAGGTATT
CTGAACAATA ATAAAACCGT CAATGTACAG TTTGACCTGG GCGCAGGTAC CACCTGCGTC
AACCGGCAGG TAGCTGAAAA ATTAGGGTTG CAGTTTGATG GTAAAACAGT CGTCACTAAT
ACACAAGGTA CCAATGAGAC GGGCACCAGC TCGGGCAATA CGCTTACGAT CGGTAATATC
AGCTGGGAAG CAGTACGCCT GACACAGGTC GGAAATATGC AGGAAGGTGA AGACCTGATC
ATTGGTAATT CCCTCTTTCG GGATAAGATC ATCGAGATTG ATTATGATAA TCTTCGGATG
ATCATTCATC AAAAACTACC TGCTTACAGC CGTGCATTTA AGCGGCAGGC GGTTTGGTTT
GAACAGAACA GACCGAAGTT TCAGGCCGTC GTTGTGGTGG GAGGGAAGTC TTATCCTTTC
TGGTTTCTCT TTGACACCGG CAGGGATGCG ACCATGGCGC TGGGCAGTGA TTTTACGCGT
CATGAACAAC TCTGGCAAAA GCTGGATAGT TTAACCATGG TCAATGGACG GAAGATCGTG
CGGTTGAATG CGGAGATTGC GGGCGTCGTC TTTCCGGATA TCGTGACCAA TGCGCATCCT
CCTGACAAGC CGGGTAGCAG AACGACCTTA TTCGGAAACC AGGTGTTGAA TCATTTTAAC
CTGATCCTGG ATAACCGGGA GGGGATGCTT TACCTGAAAC CGAACAGTCG TAGTAAAGAA
CCTTATTCTA ATTATAAAGA TTTTCTGGAG AGCATAAGAG GCAAGTAA
 
Protein sequence
MSHIHLFCSI TVFCLFSLTT KAQRLPIVKA GNANAVITDG AYVRLNWQLD PTARPDIYYV 
NVPSKPSQIT LKTDQDSIRF QTKPGKAYDF IALLNGKDSC FIRIASIQDT LTQLRGRSVH
PTSDTLPFVL HGSRIYLKGI LNNNKTVNVQ FDLGAGTTCV NRQVAEKLGL QFDGKTVVTN
TQGTNETGTS SGNTLTIGNI SWEAVRLTQV GNMQEGEDLI IGNSLFRDKI IEIDYDNLRM
IIHQKLPAYS RAFKRQAVWF EQNRPKFQAV VVVGGKSYPF WFLFDTGRDA TMALGSDFTR
HEQLWQKLDS LTMVNGRKIV RLNAEIAGVV FPDIVTNAHP PDKPGSRTTL FGNQVLNHFN
LILDNREGML YLKPNSRSKE PYSNYKDFLE SIRGK