Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3554 |
Symbol | |
ID | 8359721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4430917 |
End bp | 4431897 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644965725 |
Product | anti-FecI sigma factor, FecR |
Protein accession | YP_003123219 |
Protein GI | 256422566 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0813292 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.017329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCATC ATCCACCCGG CAGAGCACAG CTCATTGCCT ATTTTGAAGG TAAGATTACA GACGCCGCCA GTAGGGAGGC AATTGAAGCA TATATCGCGG CTGATACAGA TCCGCTGCTG GTACAAGCCT GTATGCAGAC TGCCTGGAAG CATATCCCGG AAGCCGATGT ACCGCAAAGT ACACCAGCGG ACTGGGACCA GTTCCGGATG ATGGCAGGTA TACGTACATC TCCGAAAAGA TTCCTTCGTC CGATGCTGGC AGCTGCCGCT ACTTTATTAT TACTCCTTTC TGTATCCTAT ATCTATTTTA TACTCCGCAA GCCAGCCGTC AATACGCCGC TTGCCTGGCA GGAGATCACT GCCGGTCCAC GGGAACTACG CACCATCCGC CTGCCCGACG GCAGTGATCT CACACTTTTC CCCGGATCAA CAGTCAGCTA TAACAATGAA TACAATAAAC ATGCACGTGC CATCAGACTA AAAGGACGCG CCTATTTTAA CGTCGCTACT GTTGCGGATA AACCATTTAC TGTTTCCGCC GGTAACTATA CCACGCAGGT ACTGGGTACC TCCTTTGAAA TATTTGAACG TCCACAACGA CAGGAGCTCT CAGTCGTTCT GGTATCAGGT AAAGTCAGAC TGTTAAATGC GCAGCAACAG CCCTTATCTG AGCTGCGACC GGATCAGCAG ATGACCATCC ACACCGACAA TGCCCGCTTC AATATCCTGC CTGTCGCGGC AAAGACGATG GTTGCCTGGA CCACAGGAAA ACTCTCTTAT GATCAGGCGA CACTGGCAGA CGTCTGTCGC GAACTGGAAA AATGGTATGG GGTCAATATC ACGATACAGC GGCCGGCATT GGAGAAGAAG CGTATTACGG CCGACTTTGA ACACCTTTCC CTGACAGCCG TCCTGCATAT CCTGTCAGAG ACTGCAGGCT TTAACTATAA AGAGAAGGAC AATCACATAG CAGTATACTA A
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Protein sequence | MIHHPPGRAQ LIAYFEGKIT DAASREAIEA YIAADTDPLL VQACMQTAWK HIPEADVPQS TPADWDQFRM MAGIRTSPKR FLRPMLAAAA TLLLLLSVSY IYFILRKPAV NTPLAWQEIT AGPRELRTIR LPDGSDLTLF PGSTVSYNNE YNKHARAIRL KGRAYFNVAT VADKPFTVSA GNYTTQVLGT SFEIFERPQR QELSVVLVSG KVRLLNAQQQ PLSELRPDQQ MTIHTDNARF NILPVAAKTM VAWTTGKLSY DQATLADVCR ELEKWYGVNI TIQRPALEKK RITADFEHLS LTAVLHILSE TAGFNYKEKD NHIAVY
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