| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3539 |
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| Symbol | |
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| ID | 8359706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4408135 |
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| End bp | 4409625 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965710 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003123204 |
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| Protein GI | 256422551 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.247427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.288919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TATTCCCATA TGGCATTATT CTTCTGACGT TTATCTGTGC TTGCAGTAAA
CTGGAAGAAA CACCTTACTC GTCGATCTAC ACAGATAATT TCTATAAAAC AGCAGAGGAT
GCAGAAGCTG CACTGGCTTC CGTTTATACC GAGCTGGCAG ACCTGTACGC CGGTCCTTCC
GCACTGATCG TACCTGATTT CAGTGCCGAC CAGATCTATC CGAGACCGGT AGTCGGAAGA
GATACGTATA CCTTGTTCAG CTTTGATCCG CAGTATAGTG CTGCCGCGAG TTACAGTCGT
ACGAATGAAT CGCCGGTTGA TATCTGGAAT AACTGTTATT CGGGTATTGA AAACGCGAAC
TGGTTGCTGA TGAAGTTACC GCAGACAAAC ATGAGCAATG AAACCCGTAA ACGGCAGATC
TTCGGCGAAG CTTATTTTAT GCGGGCTTTC TATCACTGGT TCCTGGCAAA GAACTTCGGC
GAGATCGTTA TCAGAACAAA ACCCAGCCAG ACCATCGAGG ATGCATATGT GGGTAAAAGC
GCCAAAGCAG ATATTTACAA ACAGATCTAT GCCGACCTGG ATTCCGCAGA AGCTGCCTTG
CCTGCATACA GTAGTTCCCT GGTAAAAGGC CGTCCCTGTA AAGAAGCGGC CGCTGCACTT
CATGCCAAAG CTGCTTTATA CGGCGAAGAC TGGGCAGTGG CATTACAGGA AGCAAAAGTA
GTATTGACCA GCGCTTCCGG TGTCGGCTTA CTGGATAATG TACTGGATGT ATACGATGTG
ACAAAAGAAG ATGCCGCCAG AAGAGAAAAT CTCTGGGCCT TTGAAGCAGA GTCTATCGTG
AATGGCCGTA GTTCTCAGAT CATGAGTCTG TATGGTCCGC CGAATAGTGC CGCTCCTGCA
TATGGCGCTA CTTCCTATGG TTCTGCTTTC GCTTACCAGT CTTTCTTTGA TTCATTTGAT
CCTAAGGATA AACGCCGGCA GCTCATGGAT ACCAATTACA CTAATAAACA GGGTGTTATT
ATCCACCAGG CGGCTATCAC GCCTATCACC AAACAAGGTG TGCTCGTCAG GAAGTATGCG
GATAAGAATT CCAACGGTGG TAGCCACGCA ACGAACATTC CTATCCTGCG TGTGGCGGAT
GTATACCTGG TCGCTGCCGA GGCAGAAGCA AGATTAAATG GTGGATCTGC CACTGCTTAT
CAGTATATTA ATACCGTAAG AGCAAGAGCC GGACTCGACG CCTTAGCGGA AGGATTAGGT
AAAGACGATT TTATAGCCGC CGTATTGCAG GAACGCAGCT GGGAACTGTA TGCAGAAGGT
GATCGCTGGT ATGACCTGAG CCGTACCAGT ACCTTCCGTC AGTTAGTGCC ACCGGCAGTA
AATGATGTGT ACAAGATACG CAGTCCGCAG CCACGTAACC AGTATTTTCC GATCCCTCAG
AACGAAGTAA ATGCCAATAC CCTGCTGGAG CAAAATCCGG CCTGGAAATA A
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| Protein sequence | MKKIFPYGII LLTFICACSK LEETPYSSIY TDNFYKTAED AEAALASVYT ELADLYAGPS
ALIVPDFSAD QIYPRPVVGR DTYTLFSFDP QYSAAASYSR TNESPVDIWN NCYSGIENAN
WLLMKLPQTN MSNETRKRQI FGEAYFMRAF YHWFLAKNFG EIVIRTKPSQ TIEDAYVGKS
AKADIYKQIY ADLDSAEAAL PAYSSSLVKG RPCKEAAAAL HAKAALYGED WAVALQEAKV
VLTSASGVGL LDNVLDVYDV TKEDAARREN LWAFEAESIV NGRSSQIMSL YGPPNSAAPA
YGATSYGSAF AYQSFFDSFD PKDKRRQLMD TNYTNKQGVI IHQAAITPIT KQGVLVRKYA
DKNSNGGSHA TNIPILRVAD VYLVAAEAEA RLNGGSATAY QYINTVRARA GLDALAEGLG
KDDFIAAVLQ ERSWELYAEG DRWYDLSRTS TFRQLVPPAV NDVYKIRSPQ PRNQYFPIPQ
NEVNANTLLE QNPAWK
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