| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3538 |
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| Symbol | |
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| ID | 8359705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4405093 |
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| End bp | 4408113 |
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| Gene Length | 3021 bp |
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| Protein Length | 1006 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965709 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003123203 |
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| Protein GI | 256422550 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.740617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.292963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC GTTTATTTCA ATTATTGGGA ATTTTCCCAA TACTGCTCAT CCCAATACTT
TGTTTTTCGC AGCAGCTGAC GGTGAAGGGA AGGGTCACCA GCGCTGATAA CGGGGAGGCA
TTACCCGGCG TGACTGTCAG GGTGAAAGGC GCCGCTACCG GCGCTGTATC GGGTCCTGAT
GGCAGTTATA CCTTAGCGCT TAAACAACCT GCTACCACCC TCGTATTTAC ATTCACCGGT
TATGCCACAC AGGAAGTAGC TGTGGAGGGG AAAAGTCAGC TTGACGTTGC ACTGCAATCG
GGCAGGAAAG ACCTGGATGA AGTCGTGGTA GTAGGATATG GTACACAGCA GAAAGCCAAC
GTCGCTGGTT CCATCACATC AGTAAAAACT GCTGATCTTA AACAGACGCC TATCTCCAAC
GTCGTACAAG GCTTACAGGG CCGTGTATCG GGTGTACAGA TTACGCAGAA TTCCGCTGCT
CCCGGTGGAA ACATCAGTAT GCGTATCCGG GGTGTGAACT CCATCAACGG TACCTCTGAA
CCACTCTACG TAGTAGACGG TGTGCAACTG TCTAACTCCG GTGGTGTCAA TGACATCAGC
TCCCTGTCTA TTATCAACCC CAATGACATT GAGTCCGTCG CTGTGCTGAA AGACGCTTCC
GCAACGGCTA TCTATGGTGC GCGTGGGGCA AATGGGGTAG TGCTGATTAC GACCAAACGG
GGTAAATCCG GCAAGACCGT AGTCAGTTAC GACGGCTATT ACGGTGTACA ACGTACGACT
AAACGGATGG ACATGATGAA TGCAGCCGAA TTTGCCGCAC TGGAAAATGA GATCTATAAA
ACAAGCGTAT ACGAGAATCC CGCTGCATTA GGTGAGGGTG TAGACTGGCA GGATAAAATA
TTCCGTGATG CACCTATGCA GAATCACCAG GTAACAATCG CGGGTGGTTC GGACAGAACA
CAGTTCGCCA TGTCAGGCAA CTATTTCAAA CAGGATGGTA TCATGCTCAG TTCTGACTTT
ACACGTTATT CCTTCCGCCT GAATTTCGAT CACCGGGTTA GTAATCTGTT GAGGGTGGGG
GCCAGCATGT TTACCAGTTA TGTAGTCAAT AATACCGTAC CCGCTGGTTC AACCAGTATA
GACGCGGGGG CCGTAACCGG TAGTATGTTG GGCGCCGCAA TGGGCGCTCC GCCGACATTA
GAACCTTACA GGGCAGATGG TACGATATTT CCCTTCGGGG ATCAGATGAA TGGCAGATAC
CGGGAGGTAG TCAATCCTAT CGGACTGTCA ATGATCCTGA ACAGGGATAA GGTCAACCGG
ACATTAGGAA ATATCTATGC AGAGATTACG CCATTCAAAG GACTGACTTA CCGCGCTAAT
TTCAACCCGG TATTATCTGG TACACTGGCG GACTACTATT CTCCCCGTGC GATTATGAAT
ACAGGTGATC TCGCTGGTGG TGGCGGTTCT GCTTCAAAGA CGAATTCCAA TAACGTCGTC
TTACTCCATG AAAGTATCAT TACCTACGAA ACGCGTATCG CCAAAGAACA CGCCTTAAAG
GTAACAGGCG TATTCGCTAC ACAGAGTAAC AATTCAAATT CCAATACTAT TAACGCCAGT
AAGTTTCCCA ACGATGCCAC TGCAAACGAA GCCGTGCAAC TGGCCACAGA AAGGACCGTC
AGCAGCAGCC GTTCCAAAGA CAGACTCGAC TCCTATATGG GGCGTATTAA CTACGGCTTC
CGCGATAGAT ACCTGCTGGA CCTGATCGCG CGTGTAGATG GTTCTACGAA GTTCGGATCT
AATAATAAAT ACGGTTTCTT TCCCGCTGCC GCTATCGCCT GGCGTGCGTC TGAAGAACCT
TTTATGAAAG GTATGTCCGG TGTCAGTAAC CTGAAACTCA GATTCAGCTA CGGGCTTACC
GGTAATGCCG GTGCGATCGA TGCCTATAAG TCACTATCAC TGCAAGGTAC TTCCGGTCTT
TATTACTTCG ATCACAACCC TGTTATCGGC ATCCGTCCAA CGGGTATTGC CAACAGAGAC
CTGAAATGGG AACGCTCCTT ACAGGCAGAT TTCGGGTTTG ACCTCGGTCT CTGGAATGAT
CGTGTAAATG TGACAGCAGA TATCTATCAC AAGAAAACAG ATGATCTGCT GTTTGTGAAA
ATACTCCCTG GTTCATCCGG CTATAGCGAA GTAACCGGCA ATTTCGCCAG TATGGAAAAT
AAAGGGCTGG AGTTTTCTAT GGACGCTGTC ATCCTGGACA AAGCCGTAAA ATGGTCAGTG
GCGGGTAATA TCTCCTTCAA CAGAAATAAA CTGCTGTCCC TGGCAGATGG TCTTTCAGAA
TATTCAGTAA GTAACTACCA GGTCATGCAG GTAGGTCAAC CGCTGGCTTT ATTCAAAACT
TACGTATTTG ACGGTATCTA TCAGACGGGG GAGACGGTGC TGGAAGGATC CGGTAGCCGT
ACCGGTGGTG TGAAAGTAAG GGACCTTAAC AAAGATGGTA TCATCAGCGC CGGAGACCAG
ACGATTGTCG GTAACGCAAA TCCCTCTTTT ATCTATGGCT TCTCCACCAA CCTGAGTTAT
AAAAACTTCG ATTTAAGTGC CTTCTTCTCC GGTGTGCAAG GCAATAAAGT ATACAACCTG
ATCCGCTATA CTTTTGAAAA CCCATTGGGT GGCAGGAATA TGTACAAGTC GCTGGTTAAC
CGCTGGTCTC CTGATAATCC CAGCAATGAG TATGTCAGTG GTTTTCAGGG TGGCAGATTG
CCTTTGAGCG ATCGTTTTAT GGAAGACGGT TCTTTCCTCC GCTGTAAAAA TATTACCCTC
GGTTATCGTC TGCCAAAGAT CAGCAATATC AGTTCCGCAA GGGTATATGT CAGCGCCAAC
AACCTGTTTA CCCTGACGGA CTATACCGGT TACGATCCCG AAGTGAATAC CTTCGGTAAT
TCCAATAAAC AGATAGGGGT AGATAATCTG GTATATCCCA CTGCCCGTTC ATTCCTGCTT
GGTCTGCAGG TAGCATTCTG A
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| Protein sequence | MKKRLFQLLG IFPILLIPIL CFSQQLTVKG RVTSADNGEA LPGVTVRVKG AATGAVSGPD
GSYTLALKQP ATTLVFTFTG YATQEVAVEG KSQLDVALQS GRKDLDEVVV VGYGTQQKAN
VAGSITSVKT ADLKQTPISN VVQGLQGRVS GVQITQNSAA PGGNISMRIR GVNSINGTSE
PLYVVDGVQL SNSGGVNDIS SLSIINPNDI ESVAVLKDAS ATAIYGARGA NGVVLITTKR
GKSGKTVVSY DGYYGVQRTT KRMDMMNAAE FAALENEIYK TSVYENPAAL GEGVDWQDKI
FRDAPMQNHQ VTIAGGSDRT QFAMSGNYFK QDGIMLSSDF TRYSFRLNFD HRVSNLLRVG
ASMFTSYVVN NTVPAGSTSI DAGAVTGSML GAAMGAPPTL EPYRADGTIF PFGDQMNGRY
REVVNPIGLS MILNRDKVNR TLGNIYAEIT PFKGLTYRAN FNPVLSGTLA DYYSPRAIMN
TGDLAGGGGS ASKTNSNNVV LLHESIITYE TRIAKEHALK VTGVFATQSN NSNSNTINAS
KFPNDATANE AVQLATERTV SSSRSKDRLD SYMGRINYGF RDRYLLDLIA RVDGSTKFGS
NNKYGFFPAA AIAWRASEEP FMKGMSGVSN LKLRFSYGLT GNAGAIDAYK SLSLQGTSGL
YYFDHNPVIG IRPTGIANRD LKWERSLQAD FGFDLGLWND RVNVTADIYH KKTDDLLFVK
ILPGSSGYSE VTGNFASMEN KGLEFSMDAV ILDKAVKWSV AGNISFNRNK LLSLADGLSE
YSVSNYQVMQ VGQPLALFKT YVFDGIYQTG ETVLEGSGSR TGGVKVRDLN KDGIISAGDQ
TIVGNANPSF IYGFSTNLSY KNFDLSAFFS GVQGNKVYNL IRYTFENPLG GRNMYKSLVN
RWSPDNPSNE YVSGFQGGRL PLSDRFMEDG SFLRCKNITL GYRLPKISNI SSARVYVSAN
NLFTLTDYTG YDPEVNTFGN SNKQIGVDNL VYPTARSFLL GLQVAF
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