| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3537 |
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| Symbol | |
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| ID | 8359704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4403801 |
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| End bp | 4404865 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965708 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_003123202 |
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| Protein GI | 256422549 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.234016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAA AGTACATTAC GATCATCGAC ATCGCCCGGC AACTGAACAT CTCAAAATCG
ACGGTATCAC GTGCATTAAC GGGGCATCCC AATGTGAAGG AACATACCCG CAAGGCGGTC
ATGGAACTGG CGTCGAGTAT GGAATACCAG CGTAATTCGC TGGCATTGGG CTTTAGCAAA
CACAATACGA ATACGATCGG CATTATGGTG CCGGAGTTTA TGTCCACGTA TTTCCCTTCG
GTGATTGTCG GCGTACAGGA TGTGATGCAG GCAGCTGGAT ATAATGTAGT GATCTGTCAG
CAGAATGAAT CGTATGAGTC GGAAGTCTCC AATATGAAGT TATTGCTCTC CTATCGTGTT
GATGGCATCA TTGTATCGCA TACCAAAGAG ACGCGCAACT TTGATCATTT CACCCTGGCA
CAACGCAGGG GCGTACCACT GGTATTCTTT AACCGGGTAC CGGAAGATAT GAATGTGCCG
AATGTGATTG TCAATGACTA TGAAGCGGCT TTTCAGGCAG TGGAACACCT GATCCGTATT
GGCAGAAGAA GGATTGCACA TCTGGCAGGG CCGGAGTCAT TGGTGAATAC CCGTTTACGC
AGACAGGGTT ATCTTGATGC ATTAAAGAAA CATGGTATTG CACATAATCC CGATCTGATG
TTGTCTTATG ACCTGACGAC GGAAAAAGTA AAGATCTATA TGAAGCATTT TCTTGAACTG
GATACACCAC CGGATGCCTT ATTTGCCATC AATGATCCAA CGGCGATTGC GGCAATGGAA
GTGGTGAAGG CAAAGGGATT ACGAATACCG GAGGACATTG CCATTGTAGG CTTTAGTAAT
GACTTTTCTG CGGGGCTGGT ACATCCGGGA CTGACGACTG TCGCACAGCC GACTTCAGAG
ATCGGCCGTA CAGCAGCGGA AATGTTGTTA CAGGAAATGC GGGCGAAGGT AAAGAATGAT
TATACCATTA AGAAAGCGCC AACAGTGCAG TTGTCTACGC GGCTGATCAT ACGTGAGTCT
ACGGTGCCGG AGGAGAAGTC AAAAAAGATG GTGAAGAGTA AATGA
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| Protein sequence | MKAKYITIID IARQLNISKS TVSRALTGHP NVKEHTRKAV MELASSMEYQ RNSLALGFSK
HNTNTIGIMV PEFMSTYFPS VIVGVQDVMQ AAGYNVVICQ QNESYESEVS NMKLLLSYRV
DGIIVSHTKE TRNFDHFTLA QRRGVPLVFF NRVPEDMNVP NVIVNDYEAA FQAVEHLIRI
GRRRIAHLAG PESLVNTRLR RQGYLDALKK HGIAHNPDLM LSYDLTTEKV KIYMKHFLEL
DTPPDALFAI NDPTAIAAME VVKAKGLRIP EDIAIVGFSN DFSAGLVHPG LTTVAQPTSE
IGRTAAEMLL QEMRAKVKND YTIKKAPTVQ LSTRLIIRES TVPEEKSKKM VKSK
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