Gene Cpin_3531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3531 
Symbol 
ID8359698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4397009 
End bp4397407 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content53% 
IMG OID644965702 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003123196 
Protein GI256422543 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.179982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.511756 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG CAAAAGCGCA GGCAGCAGTG TCCCGTCGTT TTGACCGGCT AAACATGCAT 
GGGATTGGCT TTACAGACTT CATGATACTT TATATTCTGC AGGAATCACC TGATGGCAAA
TTACGCCGGA AGGACCTGGC GGAGAAGACG AGTCTGACGG CATCGGGGAT CACCCGGCTC
CTTTTACCGA TGGAAAAGAC GGGGTTAATT GCCCGGGAGG CGAATGAGCG GGATGCCCGC
GTCAGTTATG TGGTGATGAC GGAAGCAGGC CGGCGGATCT ATGAAGAAGC GAAGTATACG
GCGGATGCCA TTGCGGCGGA GCTGATTCCT GTGGAACAAT TCAAAAAATA TTCTGCCGCA
GCAGCATTAT TCAAGCTGCT GGGCGCCGTG ATCATATAA
 
Protein sequence
MSLAKAQAAV SRRFDRLNMH GIGFTDFMIL YILQESPDGK LRRKDLAEKT SLTASGITRL 
LLPMEKTGLI AREANERDAR VSYVVMTEAG RRIYEEAKYT ADAIAAELIP VEQFKKYSAA
AALFKLLGAV II