| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3525 |
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| Symbol | |
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| ID | 8359692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4391143 |
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| End bp | 4392060 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644965696 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003123190 |
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| Protein GI | 256422537 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.96413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGAT TTAGCACAAT TGGTGAATTT TTACAATTCA GGCAGTTACC TCAACCAGAA
CATCCTTTGA TTTGTGTGTT CAAGGTGGAG GCGGTTGAGC GCGTGCTGAT AGAAGAGCCT
AAAAGCTGGT TGTATGATTT TTATGCGATC GGCCTGAAAA GGGTTTCCAA TGCAAAGGAG
GCCAGGTTAA AGTACGGGCA GCAGCAGTAT GATTTCGATA ATGGGATCAT GTCTTTTGTG
GCGCCCGGAC AGGTATTAAG CTTATCGCTG GACGATCATG TTAAACTAAT AAAACAATCA
GGATGGATGA TGCTCATTCA TCCTGATTTT CTCTGGAATA CTTCATTGGC CCAGGCTATT
AACCGGTACG ACTTCTGGGA TTACACGGTA CATGAGGCAT TATTCCTCTC CGAGAGGGAA
GAAGCGACAC TCGTACATAT TATGCAGGAG ATACAGCGGG AATGCCAGTC GAACATAGAT
AAATTCACCA AGAGCATTAT CATCTCCCAT ATTGAGACCT TGCTCAATTA TGCAGACCGC
TTTTACCATC GTCAGTTTAT TACCCGTGAA AAAGCCCATC ACCGGATATT AGAACGCCTG
GAGAAGGTGT TGAATGACTA TTTCAACAGC GATGATCTGA TTAGAAAAGG ATTGCCGACT
GTCAGCTATC TTGCCCAGTC TTTGAATCTG TCGCCGAAAT ATCTGAGTAG TTTGCTTAAA
GTGCTGACCG GGGAGAACAC CCAGCAGCAT ATCCATAGGA AAGTAATCGA AAAAGCAAAA
GAGAAACTAT CTACTACAAA TCTTTCTGTC AGTGAAATCG CTTACGAGCT GGGATTTGAG
CATATTCAGT CTTTCAGCAA ACTGTTCAGG ACTAAAACTA ACCAGTCCCC CATGGAGTTT
CGCCAGTCAT TTAACTGA
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| Protein sequence | MKRFSTIGEF LQFRQLPQPE HPLICVFKVE AVERVLIEEP KSWLYDFYAI GLKRVSNAKE
ARLKYGQQQY DFDNGIMSFV APGQVLSLSL DDHVKLIKQS GWMMLIHPDF LWNTSLAQAI
NRYDFWDYTV HEALFLSERE EATLVHIMQE IQRECQSNID KFTKSIIISH IETLLNYADR
FYHRQFITRE KAHHRILERL EKVLNDYFNS DDLIRKGLPT VSYLAQSLNL SPKYLSSLLK
VLTGENTQQH IHRKVIEKAK EKLSTTNLSV SEIAYELGFE HIQSFSKLFR TKTNQSPMEF
RQSFN
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