Gene Cpin_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3515 
Symbol 
ID8359681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4380414 
End bp4381559 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content37% 
IMG OID644965685 
Producthypothetical protein 
Protein accessionYP_003123180 
Protein GI256422527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCAA TTCCACCAGC GTTGAGTAAC ACAATAGCAA GAATATATTT TGATTTAATT 
AAGGTGCGAA TTTTCGAACG AATTCACCTA ATTAGCATGG TAATGGATGT ACTGGGGGGA
AACCAGCCTT TGTCTAGTAT ACAGCATGAT GCGGCTAACG GTAACTCCAA AATATCAGTA
GCAAACTTTT TCGTAAATGG AAATTTGATA AAGACTTTGG CAGATCTCCC AAAGCTGAAA
ATGTCAAATG CGCATAACTG GGTAAGCACG TACAATAGCA CACTCAGAAA TATTCTTACC
CATTTTAACC ATGAAATGAG ACTGAGGAAA ATCATCCTGG TCAGTCCAAC GAATGCAGCC
ACAGTTGATC GTGAACTTAA AAGACGCTTT AAAATGATGA CAGGGAATAG CGGAAAAAAA
GCAATACTCA CCAAATTTGT CAATTTCATT TTAGATTACG AAGGCATGCA TAAATATGTC
GCCTATCAAG TAGGAATAGA GCTTGGTATT GACTGTTGCC CCTACTGCAA TAGAATGCCA
AATCAAACTA TTGTAGATGA GAATGACAAT GGCGTGATTA GACCAGCATT CGATCATTTC
TTGTCACAAA GTCACTATCC TTTTTTAGCT TTAAGTTTTT TCAATCTTGT TCCGTGTTGT
TTTTATTGTA ATACTAGTCT AAAAGGAGGT AAGAAATTAT CCATAAATAC CCACTTGAAT
CCATTCCTTC ACGGGTATGG TCAAGACTGT GTATTCAAGG CTAATTTGAA GAATCTACAT
GCGGATATAA GCCATCCTGA TAATTTCGAA GTTCGGCTAC ATTGCGTCAT TCCGGCTACC
AACCCTAAAT ACAGAAGAAT TGTTGGAAAC AATCTCTCGG AAGGAAATAT TAATCTGTTC
AAATTGAACA GTTTATATTA CTCTCATCGA GATATAATTG GGGAACTTTG GCTCAAAGCT
CAAAAGTATA GTTCAGGACA TCAAGGTGCA CTATTTACAT CGCTTGGCTT AAGGCAAGAA
GAAAAAGAAA AGTTTTACCG ATTATACTTC GGAAATTATC GCAATGAGGA TGACTTTGTC
AAGCGTCCGC TATCAAAGTT GACCCATGAC ATTATTAGGG AAATGTTGCC GGACCTATTT
GTATAA
 
Protein sequence
MIAIPPALSN TIARIYFDLI KVRIFERIHL ISMVMDVLGG NQPLSSIQHD AANGNSKISV 
ANFFVNGNLI KTLADLPKLK MSNAHNWVST YNSTLRNILT HFNHEMRLRK IILVSPTNAA
TVDRELKRRF KMMTGNSGKK AILTKFVNFI LDYEGMHKYV AYQVGIELGI DCCPYCNRMP
NQTIVDENDN GVIRPAFDHF LSQSHYPFLA LSFFNLVPCC FYCNTSLKGG KKLSINTHLN
PFLHGYGQDC VFKANLKNLH ADISHPDNFE VRLHCVIPAT NPKYRRIVGN NLSEGNINLF
KLNSLYYSHR DIIGELWLKA QKYSSGHQGA LFTSLGLRQE EKEKFYRLYF GNYRNEDDFV
KRPLSKLTHD IIREMLPDLF V