Gene Cpin_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3485 
Symbol 
ID8359651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4349379 
End bp4350131 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content48% 
IMG OID644965658 
Producthypothetical protein 
Protein accessionYP_003123153 
Protein GI256422500 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC AAATGTCAAT CTTCACCTTT ACAGGTAAAC TCGGTAACCT CATAGGTTAT 
CAGCGCAATG GTAAATACTT TTTGCGCAGT GTGCCCCAAT CAGTACGGCA GACCGCTGCT
ACCCGACGCG CGTCCAGGCG CTTCGGCCTG GCCAGCAGGA AAGCGGCCCT GATCCGTCAT
GCCTGCTACC CTGAACTGGA CATCCGTTGT GACGGCGCCC ATATAAATCG CCTGAACAAG
GTACTTATTG CAGCAGGTGA TGATCATACG GCGATAGCCG GTTTCCATTT CAATCAATAT
GCTGGCTTAG ATCGTTTTTT TACAGTAATT CCCCGGCTTT TCAGAAATGA AGTCTTGCAC
ATCCCGGCAC AAAGCATCAT CCGGCATAAA GGTATTACTG GACTGGAAGT AAAAGTCATT
GCAATACGTA TCGATTTTAT GTCCGGTCAG GTCACAGGGC GCAGAGCAGT TACCTTGATG
ATAGATCCGG AAACTACCTT CGAAGGAAGG GATATTGCCC TGGACGTCCC TGGCGACGGC
ACATTGGTGA TAATCCTCCA GGTGAGGGCC CTGGATAAAA ATGGCATAGC TGGGAACAGA
CAACACATGG CTGCTGATAT TATTACCGTG ACAGCGCTAC AAATGCATGG ATGTTTTAAT
AAAAGAACTC ACCCGGAGCG CTTAACATTG CAGCAACTGT TAATACCAGA CATTAGACAT
ATAGCCGATA AAGGTCTGGT TCAGCTGGAA TAA
 
Protein sequence
MAKQMSIFTF TGKLGNLIGY QRNGKYFLRS VPQSVRQTAA TRRASRRFGL ASRKAALIRH 
ACYPELDIRC DGAHINRLNK VLIAAGDDHT AIAGFHFNQY AGLDRFFTVI PRLFRNEVLH
IPAQSIIRHK GITGLEVKVI AIRIDFMSGQ VTGRRAVTLM IDPETTFEGR DIALDVPGDG
TLVIILQVRA LDKNGIAGNR QHMAADIITV TALQMHGCFN KRTHPERLTL QQLLIPDIRH
IADKGLVQLE