| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3481 |
|---|
| Symbol | |
|---|
| ID | 8359647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4345939 |
|---|
| End bp | 4346292 |
|---|
| Gene Length | 354 bp |
|---|
| Protein Length | 117 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644965654 |
|---|
| Product | transcriptional regulator, HxlR family |
|---|
| Protein accession | YP_003123149 |
|---|
| Protein GI | 256422496 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TAAATTGCGA ACCAACACCT TCTATTGATA AGCGATTAGC TCTCAGAGAT
GCTATTGAGT TATTGAGTGG CAAATGGAAA GTATGTATTC TTACGAATTT ATATCACCGC
GGCGCCATGC GCTTTAAAGA CATACTGGAA ACCTCAAAGG GGATCACCCC CAAAGTACTG
TCGAAGGAAT TACAACAGCT GGAGGAAAAT TTGCTGATTA CCCGAACAGT GAATAATACA
AAACCTATTA CAGTGTCCTA TGCGCTTACT GATCATGCCA GCGAAACCCA CCCCGTTATA
AATGCCTTAA TTGTATTTGG GTTAAGGCAT AGGACGAAGA TTAAAAACAA ATAA
|
|---|
| Protein sequence | MEKLNCEPTP SIDKRLALRD AIELLSGKWK VCILTNLYHR GAMRFKDILE TSKGITPKVL
SKELQQLEEN LLITRTVNNT KPITVSYALT DHASETHPVI NALIVFGLRH RTKIKNK
|
|---|
| |