| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3475 |
|---|
| Symbol | |
|---|
| ID | 8359641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 4339710 |
|---|
| End bp | 4340627 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644965648 |
|---|
| Product | V8-like Glu-specific endopeptidase-like protein |
|---|
| Protein accession | YP_003123143 |
|---|
| Protein GI | 256422490 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3591] V8-like Glu-specific endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTTC CAGATGGACT CCATACCCCG ATCACCAACA TCATCACTTC AGAATCGCCC
GTTGTGGCCC CTATGGTATC ACCGGGATCC ACAGGCGACG GAGAAGTAAT TGCACTGGGA
AATGAAGATC AGGTTGAACC TATCCCTCGT CCTGAATCCT TCGCAGAAGC ACGTATGGAA
ATTGAGATTC CCGACCTTCC GGATATCGGT ATCGCTTCTT TCGGAGCACC ACCCAATTTT
GAAGCTGTCA TTGGTACGGA CGAAAGGGTA CAGATCCAGG AAACGGAAAA ATATCCATGG
AGAGTGACTG CCTCCCTTCT GATCACGGCT GCTGACAATT CCCAATGGAT AGGAACAGGC
TGGTTTATCA GTCCGCGTAC CCTGATAACA GCCGGCCATT GTGTATACAT CAAACATAGT
GGTGTTGCCG GTCGTGACGG ATGGGTGAAG AAAATACAGG TAATGCCCGG ACGCAACGGG
AATCAGCTTC CGTTTGGTCT CGTTAACTCC GGTGAATTCT TCACAGTGAC TGGCTGGGGG
GAAAACGGTC TTGAAAATTA CGACTATGGC GCCATTATAT TGCCCAATGC ATTTCCTCAG
GATCTGGGCT TTTTCGGCTT CGCAGCACTG AGTGATGAAG AATTGTTGCA ATCTGTCGGT
AATATTGGGG GTTATCCTGG CGATAAGCCT GCTGGCACGC TCTGGTATGA TAACAGAAAA
ATCAGTAATG TAAATCCCGA AAAAGTATTT TATGAAATTG ATACTGCCGG AGGACAAAGC
GGGGCTGTCA ATTATATAAT ACGCGACGGC GAAAGGATCG GTGTCGCCAT TCACGCCTAC
GGTGGTACCA CCGCCAATTC GGGTACACGC ATCTCCGCCA ATGTTTATAC AAACCTCGAT
GCCTGGAAAA GAAGCTGA
|
|---|
| Protein sequence | MPVPDGLHTP ITNIITSESP VVAPMVSPGS TGDGEVIALG NEDQVEPIPR PESFAEARME
IEIPDLPDIG IASFGAPPNF EAVIGTDERV QIQETEKYPW RVTASLLITA ADNSQWIGTG
WFISPRTLIT AGHCVYIKHS GVAGRDGWVK KIQVMPGRNG NQLPFGLVNS GEFFTVTGWG
ENGLENYDYG AIILPNAFPQ DLGFFGFAAL SDEELLQSVG NIGGYPGDKP AGTLWYDNRK
ISNVNPEKVF YEIDTAGGQS GAVNYIIRDG ERIGVAIHAY GGTTANSGTR ISANVYTNLD
AWKRS
|
|---|
| |