Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3472 |
Symbol | |
ID | 8359638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4332992 |
End bp | 4336843 |
Gene Length | 3852 bp |
Protein Length | 1283 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644965645 |
Product | hypothetical protein |
Protein accession | YP_003123140 |
Protein GI | 256422487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3591] V8-like Glu-specific endopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.73031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.526995 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAACAG GTGATAAGGC TAAATTTATA GATGTCGCAG CGTTTTTGCT GCATCTTCAA AGAACATCTG GCAGTACTTT GTATATCGTG TCTGCTTCCG GTAGATTTAC TGGTTGGCTG CTGACCACTG AACTTGTTGT TATACCAGGG TTCGGGTATC TCGATGAAAC GGAAGAAGAG TTTACCTGTT ATTCTTCGGC TACTGTAGAT AGTGCGCCGT TGAAGGCCAG GTTAGTATCG ATCGCGGGAA AATGGATAAA AGATCACGAG CGGGTAGCGT TGTTGAAACT GGAAAAGCCC GTTAGTTATC CGATTCATCA TTTACAAACA GAGAATTGTA AACCAGAGGA TGATGTGATG GTATTGCAAT ATCCCCAAGG TACCCGTGCT CTGCAACTTA GTTTTGGAAA GATCCGTGAG GTAAACGATA AGTGGATTGC TTATGATGCA GATACATTGC CCGGTTCCAG CGGAGCGCCT GTTATCAATA TACAAAATGG TAAATTGATT GCCATGCATC TCCTGGCTGG TGTAGGTGAA AAGAGGTATA ATAGTGGTGT TACAACAGCC GGTATTATAG GGTTTCTCCG GACAACTGAT TATTGGCCGC AAATTGCTGC AGCACATCAG TTGTTAGATG CAAAAAGCAT ATTATCAAAA GACCTGGAAT TTTCCCAGCC TACGCCGCAA TGGGATGAAA TACATTATAA GGCAGCTGTG CAATGGAATA TCGATCCCAC TGTACTTAGT GAAGAAGAGA AAAAAGCGTT GTCTCCTCAT CTCATTAGCA AGCAAACGCC GGTATGGGCG TTGAAACCTG TGGACCGCCA GCAGATCCTT ACTTCGACTT CTATTGACAG TCTGAGAAAT ATAGAAAGTG GTATTGATAA TCATCAGCCT GGGCAAAAGG TGATCAGGCG TATTTTAAAC GGGGGGCCTT ATAATCTGGA TGAAGTGGAT GTGGAAGAAC TGCCTTACTG GCTGCAGGCC GTACGCTGGT TTAAAGGGAT TGACGAGACA TTGCCTGGTC CGGCAGAGGT AGACGGCATA CTTCAGAAGC GACGTATAAG AGCAGCCCTG ACAAACTTAG GAGGGGCTGG TTTCAGGGGG CGTGAGGAGG AATTGAATAC TTTGAAGACC TGGTATGAAG ATAACAGACA GGGATCGATA GTCATCAGTG GAATCGGAGG GATCGGTAAG ACAGCTTTGA TCAGTCATTT CTGTTTGCAG TTGCCGGAAA ATACCCTCTT ATTGTGGTTA GACTTTGATC GTGCAGATCT CACTCCTGAT GATCCGCAGT CTATTCTCCG TATCCTTATC GGGCAGATCA GGGTTCAACG CGCAGATTTT GTCGCTCCAC CGGATAACAA TGACTGGAAA GTTATGTTCA AAGCCCTGGG TGAAAACCTT AACAAAACGC AGAAAGCACT TACCCCCTCC TTAATGGTGC TGGATGGTTT CGAAGTAGCA CAGTATGCAA AACAATATCA GGGCATCTGG GAATTACTCA ATATTATATT AAAAGAATGC CCGTCCATAA AGGTTATCGT TAGTGGCAGG GCGGCTGTTG CCAGTCTTAA GCTGGCAGAT AAGCCAGCGG CATCACTTCG GCTGACAGGT ATGAAAATAC AGGATGCAGA AGAAGTGTTG GAAAAGAACG GTTTGAAGAA TGCAGCTGTC ATCCGGAAAA TGGCAACCAT GTCAAAGGGT ATTCCGTTGA TACTGAAATT GGTAATCCAC TACGTCAATA AAGGGGGAGA TGAAAATGAA CTGCAGCATG GATTACCCAA AGATACGATT GAAGGATACC TGTATCGCCG CATTTTATAC AGGGTATTAG ATGCTGACCT GCAGCCATTG ATAAGGGAGG CGCTTATCCT CAGAAAGATA ACAAGGGATA TTATCAACGA AATACTTTTC TCATTGCTTC CCGCTAATAC AACTGTTGAC GAAGTATTTG ATAAATTATC TAAAGAAATG TCATTGCTGG AAGATGGACA GGAGGGTTTG GCTACAATTC CTGGCGAAGA AGATGTTTTA AAATTACGCC CTGAGCTACA TACTTCTACT ATCAGACTGC TTGAACTGGA AGATGCGGCG TATGTAAGAT CGGTAGATCA AAAGGCGGTG GATTACTATC GTAAGCAGGA TCTTTCCTTT CATGAACATA CTGCGGAATT AGTGTATCAT TCATTACGAC TGGGAAACTT ACAGGATGCA AAAAAACACT GGCGACCAGA AATAGCGCTT TATTTGAAAA ATTCAGTGGA AGATCTGCCG GAGAAGAATA AGGCGGAAAA AGACTGGTTA AAGGACATGA TTAACCAGTC ACTCTCTGAG ACAAAGGATG ATATAGCTAT TTGGGAATCG GAGACCTATA CTATTCTAAA GGAATCTATT GCGCGTAAGT CCTACTCGGA CAGCGTCAGG CAGATATTGA ATCATCGGAA AGAAAGAAGT GCTGATAGTC CCTTATTGAT CTATGATGCT TGGGTAACAT GGCAGGAGGG AAACCTGGAA GCAGCGATCA GGTTATTAAA AAACAGCAAA ACGACGGAGC CCCGCATCAG GAAAGATCAG TTGATCTTTC TTGCATTGCT GGAAACTTAT AATGGCAACA GGGCGATAGC GGATCATTAT TTATCACAGA TTAATACTGA TCAGTGGAGT AACAGGCAAT TTGGCAATAC AGAGAACCTG GCAGTAGCAG CGGCAAGAAT GCGTCTGACG GTAGATTTAG AAAGAGAGTT AAGGGTTTTA CAGGCAATAA GAGAAGAGGC GGGTGTTAAA AGGATGGTAC TCGAACAGCA TATCCTGCAA AGGAGGGATG TGGTATGGCC CGCTTTGATA GAAGTGCTTG ACAACAGGAC TGATGATAAT TACGTGGCCG CTTATCAGAG TCTTACCGAT AAAGAAGGAC GTTTGAAATA TGAAACTTCC GGCAAGTTCA GGTTAGGTAT GAATGCGTCT GACATCCGCA GTCTTAATGA GCGTAATCAG TCCTTTATCA GGTCGAATGC AGAGAACACT TCATCACCGG TACTATTTGA ATCTATCTGG TATCTGTTAA TGTTATCGGA ATTCCGTCAG AAACAGCTGA CAGATAAGGA TGTGTTACGC GATATTTTAG AAATCGCCAC TATTCCCAGA AAGTCAATGT CGACGCTGGA AGTGGCTATT GTTTTTAGTT TGACGGTATT TCATGGAGAA GAAATGCCGG TACTATACAA AAGCTTTCGT TCTCCTTCTG TGGATGATCT TATTCTCAAT GTAGCCAGTA AATATATACA GACAGGACTG CCCCCGCTGG AGCTCAGACG AGAGGAGCTA CTCACCACTT ATCTGAGAGA ACGAAATTTA TCATCAAATA GCAATATACA AACACAATTC CTTATTGATA TCATTCAAAG GGGGAATGAT GCCGACAGAC AGGATATTGT ACGGATCATC AGAAATATGA GGGATGAAAA GCTGGCGGCC GTTATATTCT ATCTTGTAGG GCCAGACCCG CTGGAAGTAC TCTGTAAGGG ACTGCTGGGT GTTGGCGAAG AATCGAAACT AAATGCGAAA CAAAAAATAA CACCCACGGG AATGGAACTG GAAGATCTGG TAGATGCGGT GTCAAAAATG CCTATGGATA TAAACGATAT CATGCGTTAT TTGCTTGCGG AGCATGTGAA GGTGCAAATG ATAGATTTAA GCGGCTCTCC AAGAATGATT TGGTTGAACG TGATTAATTA CCTGGTGCAA AACAATCAGG TCAACACATT GTCAGACATT CTCCGCGATC TTGCGAAGGA TAATCCACAA CTGTTGACCA CGACTGAACG TTTTACAACT TTATTGAGGT AA
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Protein sequence | MITGDKAKFI DVAAFLLHLQ RTSGSTLYIV SASGRFTGWL LTTELVVIPG FGYLDETEEE FTCYSSATVD SAPLKARLVS IAGKWIKDHE RVALLKLEKP VSYPIHHLQT ENCKPEDDVM VLQYPQGTRA LQLSFGKIRE VNDKWIAYDA DTLPGSSGAP VINIQNGKLI AMHLLAGVGE KRYNSGVTTA GIIGFLRTTD YWPQIAAAHQ LLDAKSILSK DLEFSQPTPQ WDEIHYKAAV QWNIDPTVLS EEEKKALSPH LISKQTPVWA LKPVDRQQIL TSTSIDSLRN IESGIDNHQP GQKVIRRILN GGPYNLDEVD VEELPYWLQA VRWFKGIDET LPGPAEVDGI LQKRRIRAAL TNLGGAGFRG REEELNTLKT WYEDNRQGSI VISGIGGIGK TALISHFCLQ LPENTLLLWL DFDRADLTPD DPQSILRILI GQIRVQRADF VAPPDNNDWK VMFKALGENL NKTQKALTPS LMVLDGFEVA QYAKQYQGIW ELLNIILKEC PSIKVIVSGR AAVASLKLAD KPAASLRLTG MKIQDAEEVL EKNGLKNAAV IRKMATMSKG IPLILKLVIH YVNKGGDENE LQHGLPKDTI EGYLYRRILY RVLDADLQPL IREALILRKI TRDIINEILF SLLPANTTVD EVFDKLSKEM SLLEDGQEGL ATIPGEEDVL KLRPELHTST IRLLELEDAA YVRSVDQKAV DYYRKQDLSF HEHTAELVYH SLRLGNLQDA KKHWRPEIAL YLKNSVEDLP EKNKAEKDWL KDMINQSLSE TKDDIAIWES ETYTILKESI ARKSYSDSVR QILNHRKERS ADSPLLIYDA WVTWQEGNLE AAIRLLKNSK TTEPRIRKDQ LIFLALLETY NGNRAIADHY LSQINTDQWS NRQFGNTENL AVAAARMRLT VDLERELRVL QAIREEAGVK RMVLEQHILQ RRDVVWPALI EVLDNRTDDN YVAAYQSLTD KEGRLKYETS GKFRLGMNAS DIRSLNERNQ SFIRSNAENT SSPVLFESIW YLLMLSEFRQ KQLTDKDVLR DILEIATIPR KSMSTLEVAI VFSLTVFHGE EMPVLYKSFR SPSVDDLILN VASKYIQTGL PPLELRREEL LTTYLRERNL SSNSNIQTQF LIDIIQRGND ADRQDIVRII RNMRDEKLAA VIFYLVGPDP LEVLCKGLLG VGEESKLNAK QKITPTGMEL EDLVDAVSKM PMDINDIMRY LLAEHVKVQM IDLSGSPRMI WLNVINYLVQ NNQVNTLSDI LRDLAKDNPQ LLTTTERFTT LLR
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