| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3465 |
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| Symbol | |
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| ID | 8359631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4322281 |
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| End bp | 4323450 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965638 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003123133 |
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| Protein GI | 256422480 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0698654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTC TAACAAAAGC ACAGGTATTT ATAATGGCTG CAACTGCAGG TACCAGTGTA
GCAAATGTCT ATTACAGCCA ACCCATACTC AATACGATCG CACACTCCTT TCAGACATCC
GCAGAAAAAG TGGGAATCAT CTCTGTTTTG GGCCAGGTTG GTTATGGTAT AGGTCTCTTC
TTCCTCACAC CCATAGGTGA TATGATAGAA CGTAAGCTCC TGATATTGTA CCTGCAGGCA
GGCTTATTCA TCTCTCTGCT CTTAATGGCA TTCTCTCCGA CACTGCCTGT GTTATATGCA
GGAAGTCTGC TGATCGGCGT CTTCTCTGTA GTTGCACAGG TCATACTCCC TATGGCCGCC
AGCCTCGTAA AAGAAAACAG GGGTAAAATC GTTGGACAGA TCTTCACCGG TATCCTGGTG
GGCATTCTTG TTGCCCGTGT ATTCAGTGGT TTTATTACCA ACTGGCTGGG CTGGCAATAC
GTGTACCTGT TGTCTGCGGT GATGGTATTC TTTACCGGTA TCCTCATGCA GGCCGACTTC
CCTCCGATGC ATGAACGATT CGACGGCACC TACAGCAGAC TGCTTACATC AACAGTAGAC
CAGTTACGGC GATTTCCACT TTTGAGACGA ACTGCCCTAA CCGGTATGCT TGCCTTCGGT
ACACTAAGCG CTTTCTGGGT AACGCTGACA TTCTATCTGA GTGAGGCGCC ATTCAACTAC
TCCGCCTCCC TGATAGGTCT TTTTGGCTTA CTGGCCGCTG CCGGTGCATT ACTAGCACCA
ATCTTTGGTA AACTGGCGGA CAAAGGCACA CAATCCCGTT CACTGCTCTT CTCTACAGGC
ATTACACTCA TCAGTATTCT TGTGCTGAAA CTATTTCCGG GGTCCCTTAC TGGTATATGG
CTGACGGTAA TATTACTGGA CATAGGCGTA CAGGCGACAC AGGTCACCAA TATCGCTATC
ATCTATTCCC TGGACCATCT GGCCAACAGC AGGATTAACA TGGTGTATAT GACCAGTTAC
TTCGTAGGCG GCGCACTCGG TACGTATCTA TCCATTGTTT TATGGAATAC AGGCGGCTGG
AGTTGGTCCA CCTCCTTTAT GATTTTCCTG GGCGCGCTGG CCATCCTTAA TGTTATCAGC
ACCCCCCGTA TGCAAAAACA AACTCACTGA
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| Protein sequence | MASLTKAQVF IMAATAGTSV ANVYYSQPIL NTIAHSFQTS AEKVGIISVL GQVGYGIGLF
FLTPIGDMIE RKLLILYLQA GLFISLLLMA FSPTLPVLYA GSLLIGVFSV VAQVILPMAA
SLVKENRGKI VGQIFTGILV GILVARVFSG FITNWLGWQY VYLLSAVMVF FTGILMQADF
PPMHERFDGT YSRLLTSTVD QLRRFPLLRR TALTGMLAFG TLSAFWVTLT FYLSEAPFNY
SASLIGLFGL LAAAGALLAP IFGKLADKGT QSRSLLFSTG ITLISILVLK LFPGSLTGIW
LTVILLDIGV QATQVTNIAI IYSLDHLANS RINMVYMTSY FVGGALGTYL SIVLWNTGGW
SWSTSFMIFL GALAILNVIS TPRMQKQTH
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