Gene Cpin_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3458 
Symbol 
ID8359624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4314370 
End bp4314732 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content49% 
IMG OID644965631 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003123126 
Protein GI256422473 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0218436 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA ACGAATTTAA ATATTGCGGT CTGAATGTGG CACTGGGTGT CTTGTCTGGT 
AAGTGGAAAC CGGTGATTCT CTTTTACCTC TTCCATCAGG AAGAGATCAG GTTTACAGAA
TTGTGGCGGG CTATTCCCAA AGTGGCGAAG AAGGTATTGC TGGAACAGCT GCGTCAGATG
GAACAGGACG AATTGATCAT CAGGGATGAA AAGAATGGCT TTCCACCGGA AGTATGGTAC
CGTATCTCAG AAAAGGGTAG AGCATTGGGG CCTGCGCTGG CAGCGCTGGA ATCATGGGCG
AACGAACATG CGGCTGAGAA GGTAGACTTG CTGAAAATCC GGCGGAAGGT CACCCTGCGT
TAG
 
Protein sequence
MNYNEFKYCG LNVALGVLSG KWKPVILFYL FHQEEIRFTE LWRAIPKVAK KVLLEQLRQM 
EQDELIIRDE KNGFPPEVWY RISEKGRALG PALAALESWA NEHAAEKVDL LKIRRKVTLR