| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3449 |
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| Symbol | |
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| ID | 8359615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4302475 |
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| End bp | 4304982 |
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| Gene Length | 2508 bp |
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| Protein Length | 835 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965622 |
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| Product | phospholipase C, phosphocholine-specific |
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| Protein accession | YP_003123117 |
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| Protein GI | 256422464 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03396] phospholipase C, phosphocholine-specific, Pseudomonas-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.047951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0453097 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCC GCAGAGAATT TTTAAGAAAA GCAGCACTGT TATCAGGTAG TGCTGCTCTT
GCCAACGCCA TGCCGCCGGC TATTCAGAGA GCATTAGCCC TTAATCCTGC TCCCGGCAGT
ACTTTTTATG ATGCGGAGCA TGTCGTGTTC CTGATGCAGG AAAACCGTTC CTTTGACCAC
CTTTTTGGTA TGATGCAGGG TGTACGCGGA TTTAATGATC CCCGTGCCAT CCGCCTCAGC
AACCAGAACA AGGTATGGTT GCAAACCAAC AAGGAAGGAC AGACTTACGC ACCTTTCCGG
CTGAACACCA AAGACACGAA AGTGCCCTGG ATGGGATCCA CGCCACACAA CTGGACAGAC
CAGACCGATG CGCGTAACGA TGGTAAATAT GACCGCTGGC TGGATGTAAA GAAAGCCTCC
AATAAAGAAT ATGTAGCGAC GCCGCTTACC ATGGGCTATT GCGACCGCTC CGATTTCCCT
TTCTACTATT CACTGGCAGA TGCATTCACC GTATGCGATC AGAACTTCTG TTCCAGCATC
ACCGGCACGC ATCCTAACCG TCACTACTGG ATGACCGGTA CTGTCAGGGA AAAAAATACA
CCGGAAGGTG TAGCGCATCT CTGGAATGTA AACAACTACG TTACACCGGA ACTGGATTGG
AAAACTTATC CGGAGCGCCT GCAGGAAAAC GGTATCTCCT GGAAAGTATA CCAGAATGAG
CTGACCATGG GTTACGGTCT GAAAGGAGAC GAAAGCGCCT GGCTGAGTAA CTTCGGTACC
AACGTACTGG AATACTACAA ACAGTTCAAT GTACGCCTGC ACCCCGGTAG TATCGCCAAT
CTCGATCTGA AGAAAGCCAA TATACTGAAA GAAATCGCTG CGTTAGAGAA AGATCCTGCA
AATGATAACA GTATGAAACT GGCAGCTGCA AAGAAAGTAC TGGCGAAGAT CGAGGAAGAT
AAGCTGACCT ACACCATGGA AGCTTACAAC AAGCTGCCGG AAGAGCAGAA ACAACTGAAT
GCAAAAGCTT TCACTGTTAA CAGTAATGAT CCTGCTTTCC ATGATCTCAC GAACATGAAG
TATGAAGATG CTGGTACCGA CAGGGAGCTC AACATCCCTA GAGGAGATAT CCTGCACCAG
TTCAGAGAGG ATGTGAAAAA TGGTACCCTG CCGACTGTTT CCTGGCTGAT GACGCCTGCC
AACTTCTCCG ACCATCCGGG TGTACCCTGG TTTGGTCCCT GGTATGTGAA TGAAGTAATG
GAAATCCTGT TGCAGAATCC GGAAGTATGG AAGAAGACCA TTTTCATTCT CACCTATGAT
GAAAATGATG GCTTTTTTGA CCACGTTCCG CCTTATGCAG TACCTAACCC TTATAAGGAG
AACGCAGGTA AAGTGTCAGA GGGAATAGAC CCTAAAATGG ACTTTGTACT GAAAGACCAG
CAGACCAACC CTTCTGCTAC GCCTAGCCGT ATCAGGGAAA GCTCTATTGG TCTGGGGTAT
CGTGTACCGA TGATCATCGC TTCGCCATGG TCAAGAGGCG GTTATGTATG TTCTGAACTC
TTCGATCATA CCTCTTCTCT GCAATTCCTG GAAAACTTCC TCGCGAAGAA ATTCAACAAA
CAGGTAAAGG AAGAGAATAT CACGCAATGG AGAAGAACTG TCTGCGGCGA TCTTAGTTCC
GCGTTCAGAC CTTACAACGG TGAAAAGATC GAATCCCCTG AATTCCTGCA CAAACAGGAA
TTCCTTGAAA AGATCTATAG TGCGAAGTTC AAAGATGCGC CTGCCAATTT CAAGGCACTC
TCTGCTACCG AAATAGCACA GATCAATAAA GACCATGCAC AGTCGGCTTA TTTCCCGCAA
CAGGAAAAAG GTACCCGCAA TGCCTGCGCC GTTCCGTATG AATTGCTGGT AAACGGAGTG
TATGAGAAAA AGCAGAACAA GTTTGCGATC AGTTTTCAGG CAGATAATAC AGCCTTCGGC
GATAAAGCTG CCGGCGCTCC ATTCATGGTA TATGCGATGA ATCCTTATCA GCAGGAAGCA
CTGCGCACCT GGCAATATGC CACCGCTGCC GGTGATACCC TGACGGACAA CTGGGATGTA
TCCGCATTTG AGAATGGCAG ATATCACCTG CGTGTATATG CACCGAATGG TTTCTATCGT
GAATTTGCAG GTGACCGGAA CAATCCGCTG ATTAAAATAG ACAGCAGTTA CGAAAAAGGC
AAGAAAGGTA ATGCAGCATT GAGCGGTAAT ATCATCGTCA CTATCACCAA CAACGATAGC
CGTGCGATTT CAATAGAGAT CAGGGATAAC AGCTATAAAA ACACCACGAT CAAAAGAAGT
ATCGCTCCGC AGGAAACAAC GAAAGTCATC CTCAACTTAG CGAAAAGTCA TCAGTGGTAT
GATTATACAG TAAGTGTGCC GGGTACGCTG CTGGCAGAGA GTTTTGCCGG ACACGTGGAG
ACGGGTAAGG CAAGTGTGAC AGACCCGCTG ATGGGAAGAA CAGTATAA
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| Protein sequence | MDTRREFLRK AALLSGSAAL ANAMPPAIQR ALALNPAPGS TFYDAEHVVF LMQENRSFDH
LFGMMQGVRG FNDPRAIRLS NQNKVWLQTN KEGQTYAPFR LNTKDTKVPW MGSTPHNWTD
QTDARNDGKY DRWLDVKKAS NKEYVATPLT MGYCDRSDFP FYYSLADAFT VCDQNFCSSI
TGTHPNRHYW MTGTVREKNT PEGVAHLWNV NNYVTPELDW KTYPERLQEN GISWKVYQNE
LTMGYGLKGD ESAWLSNFGT NVLEYYKQFN VRLHPGSIAN LDLKKANILK EIAALEKDPA
NDNSMKLAAA KKVLAKIEED KLTYTMEAYN KLPEEQKQLN AKAFTVNSND PAFHDLTNMK
YEDAGTDREL NIPRGDILHQ FREDVKNGTL PTVSWLMTPA NFSDHPGVPW FGPWYVNEVM
EILLQNPEVW KKTIFILTYD ENDGFFDHVP PYAVPNPYKE NAGKVSEGID PKMDFVLKDQ
QTNPSATPSR IRESSIGLGY RVPMIIASPW SRGGYVCSEL FDHTSSLQFL ENFLAKKFNK
QVKEENITQW RRTVCGDLSS AFRPYNGEKI ESPEFLHKQE FLEKIYSAKF KDAPANFKAL
SATEIAQINK DHAQSAYFPQ QEKGTRNACA VPYELLVNGV YEKKQNKFAI SFQADNTAFG
DKAAGAPFMV YAMNPYQQEA LRTWQYATAA GDTLTDNWDV SAFENGRYHL RVYAPNGFYR
EFAGDRNNPL IKIDSSYEKG KKGNAALSGN IIVTITNNDS RAISIEIRDN SYKNTTIKRS
IAPQETTKVI LNLAKSHQWY DYTVSVPGTL LAESFAGHVE TGKASVTDPL MGRTV
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