| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3445 |
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| Symbol | |
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| ID | 8359611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4297369 |
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| End bp | 4298751 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965618 |
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| Product | dihydropyrimidinase |
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| Protein accession | YP_003123113 |
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| Protein GI | 256422460 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0044] Dihydroorotase and related cyclic amidohydrolases |
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| TIGRFAM ID | [TIGR00857] dihydroorotase, multifunctional complex type
[TIGR02033] D-hydantoinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00364742 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.12901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCACTGC TGATTAAAAA CGGAAGGGTT ATTACCGCTA CAGACGATTA CCAGGCAGAT
ATACTGGTGC AGGGAGAACA GATCGTTGCC ATCGGAAAAG AGCTGCCCGC CGGCGACGCT
CAAGTCATCG ATGCAACCGG TCTGCTCGTG ATGCCGGGAG GCATCGACCC GCATGTACAC
CTGGATATGC CCTTTATGGG TACCTTCTCC AGCGATACGC ATGAAACAGG TACCCGCGCC
GCCCTGCATG GAGGTACCAC TACCGTCATC GACTTCGTAT TACAGAAACA GGGACATTCT
CTGCAGGAAG CATTGGATGA ATGGAACGGC AGAGCCAACG GAACGGCTGT AGGAGATTAT
AGCTTTCATA TGGCCGTAAC TGATTTCAAT CCGGCTACCA AAGCGGAAAT AAAGACCATG
GTAGAACAGG AAGGCATTAC TTCCTTCAAA ACCTTTATGG CATACAAAGG GGCATTGATG
ATCGACGACC GCCAGATGAC CGATCTGATG CAGGAGGTAC GGCAGCAGGG CGGTATGGTC
ACCGTACATG CTACCAATGG CGACGTGATT GATTACCTGG TGGCAAAACA CCTCGCAGAA
GGAAAGACAT CTCCGCTGTA TCATTATCTT TCCCAACCGG AAGTGACGGA AGCCGAGGCG
TCTGCCCGTT TTACCGATCT GGCTAATTAC ACGGGTTGCC CTGGCTACAT CGTACATATG
ACCTGCGAAG GCGCACTCAA TGCCGTACGT AATGCAACCC GTAGAAACCA GAAAGTATAT
GTAGAAACCT GTATCCAGTA TCTGCTCCTG GATGCATCAA AATATGAGCA GGGCTTTGAC
AGCGCGAAGT GGGTTATGAG TCCGCCATTG CGCGAAGCGA AAGACCAGGA AACACTCTGG
GCAGGTATTA ATCAGGGTCT TGTAAACATC GTGGCTACAG ATCATTGTCC GTTTATGTGG
GAACAGAAAC TGATGGGGAA AGATAACTTT GCAAAGATCC CTAATGGACA TCCTGCTATC
GAAAACAGGA TGGAACTCCT CTTCAGCGAA GGTGTCAGCA AAAACAGGAT CAGCCTCAAT
AAATATGTTG AGGTGGCCTG TACCAATCCT GCGAAGATCT TTGGCATGTT CCCGAAAAAA
GGAACAATCT CCATCGGCAG TGACGCTGAT ATTATGCTCT TCGATCCTAA GGAACAACAT
ACTATTTCAG CAGCCACCCA TCATATGCGG GTAGATTATT CCGCTTACGA AGGCTGGCCG
CTGACAGGCA AGGTGAAAAC CGTGCTGCTC AGAGGGAAAG TTGCCATTGA TAAAGGCGAG
TGTCTCGTAC CCAAAGGATA TGGACAATTC ATAAAACGCA ATAAGGTCAG CGGAAAAATC
TGA
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| Protein sequence | MSLLIKNGRV ITATDDYQAD ILVQGEQIVA IGKELPAGDA QVIDATGLLV MPGGIDPHVH
LDMPFMGTFS SDTHETGTRA ALHGGTTTVI DFVLQKQGHS LQEALDEWNG RANGTAVGDY
SFHMAVTDFN PATKAEIKTM VEQEGITSFK TFMAYKGALM IDDRQMTDLM QEVRQQGGMV
TVHATNGDVI DYLVAKHLAE GKTSPLYHYL SQPEVTEAEA SARFTDLANY TGCPGYIVHM
TCEGALNAVR NATRRNQKVY VETCIQYLLL DASKYEQGFD SAKWVMSPPL REAKDQETLW
AGINQGLVNI VATDHCPFMW EQKLMGKDNF AKIPNGHPAI ENRMELLFSE GVSKNRISLN
KYVEVACTNP AKIFGMFPKK GTISIGSDAD IMLFDPKEQH TISAATHHMR VDYSAYEGWP
LTGKVKTVLL RGKVAIDKGE CLVPKGYGQF IKRNKVSGKI
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