Gene Cpin_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3439 
Symbol 
ID8359605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4289529 
End bp4290629 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content49% 
IMG OID644965612 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_003123107 
Protein GI256422454 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0406349 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0698654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATC TGAGCTTATT TAAGCCTTTC AGCCTTAAAT CGCTGAACAT AAAAAATAGA 
ATCGTAATGG CCCCTATGAC GAGGTCATTT TCACCAAACG GCGTACCGGG AGACGATGTG
GCCGCATATT ATCAGCGTCG TGCTGCAGGA GAAGTGGGAT TAATTTTATC TGAGGGTACG
GTGATTAACC GTCCGGCGTC TTCTGCAGAT CCGAACATTC CTCGTTTTCA TGGCGATATC
TCCCTGGGTG GCTGGCAGAA AGTGATCAAT GGGGTACATG CTGCCGGCGG GGCTATGGGT
CCTCAGATCT GGCACCAGGG TATCATGGAT AACCATCATT CCGGCTGGAC GCCGCTGACG
CCTTTTGAAG GTCCGTCAGG ATTGAACAGA CCAGAAAATA CGAATGGTCA TGCGATGTCA
GAAAAAGACA TTGCCGATAC CATTAAAGCA TTCGGCGATG CAGCAGCGGA TGCCAAAAGA
CTGGGATTTG ATACGGTTGA AATACATGGT GCACATAACT ACCTGATCGA CCAGTTCTTC
TCCGACAAGA CCAATCATCG TACTGATAAA TATGGTGGTA AATCGCTGGC AGAACGTACC
CGTTTTGCGG TGGAAGTGAT TAAAGAAGTG CGTAAGCGTG TAGGTGAAGA TTTCCCGCTG
ATCATTCGTC TTTCCCAGTG GAAACCGTAT GAATACAATG GTAAAATGGC CAATACGCCG
GAAGAACTGG AAGCATGGCT GCAACCGCTG GCTGAAGCTG GTATTGACAT CTTCCATTGT
TCACAGCGCC GTTTCTGGGA ACCTGAATTT GAGGAGTCTG ATCTGAACTT TGCCGGATGG
GCGAAAAAAG TGACCGGTAA GGCAACCATC ACCGTAGGTT CTGTAGGACT GAATGGTGAG
TTCCTGGCGG CGTTCAAAGG CGAGAGCTCA GAACCTAGTT CGCTGGAAGA ACTGCTGCGC
AGATTCGACA GAGGTGATTT CGACCTGGTG GCTGTCGGCA GACCATTACT GGCTGACTCC
GATTGGGTAA AGAAAATTAA AGACGAGAGA ACCGGTGAAT TAAAAGGTTT CTCCAAAGAA
GCATTGGCTC AATTGCTATA G
 
Protein sequence
MSNLSLFKPF SLKSLNIKNR IVMAPMTRSF SPNGVPGDDV AAYYQRRAAG EVGLILSEGT 
VINRPASSAD PNIPRFHGDI SLGGWQKVIN GVHAAGGAMG PQIWHQGIMD NHHSGWTPLT
PFEGPSGLNR PENTNGHAMS EKDIADTIKA FGDAAADAKR LGFDTVEIHG AHNYLIDQFF
SDKTNHRTDK YGGKSLAERT RFAVEVIKEV RKRVGEDFPL IIRLSQWKPY EYNGKMANTP
EELEAWLQPL AEAGIDIFHC SQRRFWEPEF EESDLNFAGW AKKVTGKATI TVGSVGLNGE
FLAAFKGESS EPSSLEELLR RFDRGDFDLV AVGRPLLADS DWVKKIKDER TGELKGFSKE
ALAQLL