| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3437 |
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| Symbol | |
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| ID | 8359603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4284857 |
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| End bp | 4288339 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965610 |
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| Product | WD-40 repeat protein |
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| Protein accession | YP_003123105 |
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| Protein GI | 256422452 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.67443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.247289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA GCCTCCTTTT CGCGATCTTA CTATTCTCTG GAAGTGTAAT GGCGCAGCGT
CCCAAGCTGG TTTTGCCAAT CGGACATGCT GGTTTTATCA ATGATCTTTC CTTTAGTAAG
GATGGTAAAA TGGCAGTCAC GGCAGGTTCT GACCGGACGG TCAAAATATG GGACGTGAAT
ACAGGGCTGA TACTGGCGGA TTGTCAGGGG CATACAGAAA CAGTTAATGA AGTAGAGTTC
AGCCCGGATA ATAAGTGGAT AATAAGCGCT TCGCAGGATC AGACCGCCAG GATATGGGAG
GTGAGCAGCG GTAAGGAAAA ACTAAGGCTG AGAGATAAAT ATAGTATTGA GCATGTATCT
GTTAATTACG ATGGCTCCCG TATTATCACA ACAGCTGTCA GTGACTATAT CCGCTTATGT
GACGGCAAGA CCGGAGACTT CATCTGTAAT CTTCTCGATG GTAAGAACTT CTGGAATGTT
GAATTTAGTC CAGATGGCAA GCTTGTGGTT GCTTCCAGCT TCGATGATTC CGTGTATATC
TGGGACGCAT CCACCGGCGT GCCGCACACG ATCATTAAAG AAAACAGCCT CTTCGCTCAT
TTTAGTCCGG GAAGCGATTT GATTGTCACA GGTGCCGTTG ATTCAAGTGT TCACATATGG
GATGTCCGGA CAGGTAACCT CGTTAAAACC TGCCGGGGCA GCAGGGCGAG GTTAAGTGAC
GCAACATTTT CAAGTGATGA AAAACAACTT GCAGTCGTCA CGACAGAAGG TGATGTACAA
TTGTGGGATG TGTATACGGG AAAACTTATT GCCGACTGGC CCGATGTCGG ACTAAGACCT
ACATCGATCG AATTTGTGCA GCACGACAAA CAGTTGTTGT TGTCCACCAA ATTTGAAGCA
GCTATCCTCT TGGATGCCCG CTCAGGAAAG ATACTGCAGT CATTTGATGC GGACCTGGTC
AGGTTTAGTC CCGATCAGGA GAAATATGCA GTGGTCGCAC AAGCACAGGC TACTATCAGG
AATGTAAATG ACAGTACTAG CTACACCTCT TTGCGCGGTC ATGTGTCATG GTCCGTGTAT
GCTTCATCAG ATACGGCGAA TAAACATATT GCAGTATGTT ATGGAGATGG CTCTTTGCGT
GTCTGGAGTC TGATAACAGG TATGCCGGAA TTATTGCTGG CAGATACTGC TGCCGGCATT
ACCAGAACTG TTATCAGCCC GGATGGCCGG ACAATAGCAG GATCCTCACA GTATGGAACC
ATCAGCGCCT GGGATCTGGC ATCCGGGAAG TTGCTATATA ACAAAAAATG CGCAGAGAAG
CGTATAGGCT CCATGGTCTT TTCGCATGAT GGAAAACAGT TATTAATCGG CTCAGGTCAT
AAAGCCGCTA TTGTAGACGC GAAAGATGGC GCTATACGCA GAAACTTTGA TCTGCACCGC
GATATTATTT ATGCAGTGGC CTTCAGCAGG AATGACAGCC TGGTGGCTAC CGCTTCGCAG
GACAGTACGG CCAGGATATG GAATGCCCGC ACCGGAGAAG TGATCAGGGA AATAACGTGC
AGCGGATGGG CCCTAGGGGT GGACTTTAGT CATAATGCCA GACAGCTGCT TGTGGTGGCT
GACAACGAAA TATGGGTTAA ATCCGTACCA GGAGCCGCCA CCATTATGCA TATCGCATTG
CCCCTCAGCT ATGGGCTGAC CGGCGCCGTG TTCTCCAATG ATGACAAGTA TATCATTACA
ACAGCAGAAA GCGGATTTGT ATGTATCTAT AATGTCAGCA CCGGCAAATT GTTACATGAA
TTGCACGGTA GTACGCCTGC TGCGATCGCG ACGGAAACAA GATCAGACAA TACCATGGAC
GCCCTGGCAC TAAGTCCGGA TGGCAACAAA ATTGCCACAG GAAGAGGAGA TGGAAGAGTT
GAAGTATGGG ACATCCATAC AGGTAAAGCC CTGTTCCCAT TATTAGGACA TACTGATTAT
GTACATTTTC TTTCATTTAG CGCCGACGGA AAGTACCTGA CCAGCTTATC CAAAGACCGC
CGGGCCTTCA TCTGGGATAT TAAGAAAAGG CAGGCATTGT ATAGCTTCTT TCCGGTTGAC
AGAAGCGGTT TTTTAATCCA GGATCCGGAA GGGTTCTATC GTTGTTCTCA TGATGCAGCC
AAACTACTGC ACTATGTAAT ACCGGAAAAT ACCATTTTGG GGTTTGATCA GCTGGATATA
CGCTTTAACA GACCGGATAT CTTACTGGCA AGAACAGATC CCTCAGATAC CGCATTAATA
GCCGCTTATC ATCAGGCTTA CCTGAAGCGG ATCCGGGACC TGCGTATTGA TACCACGCAA
TTCTCCGATG ACTATAGTTT TCCTGCTATG GAAATCACCA ATCGTGATAG TATTAATTTT
CTGCAAAATG TGGATACCGT TCAGCTTGAC TTATCTGCAG AAGATGATGA CCAGGACCTG
TCTTCAGTAA ATGTCTGGGT AAATGAAGTG CCCATATATG GCGCAAACGG TATGGCCATC
ACCTCCGCGG AAAAATCGAC GTTCGATACA ACGCTTACCA TTACGTTATC AAATGGCGTC
AATGTCATTG AAGCTGCCGC CATGAATAAA GGTGGTATCA GCAGCTACCG CTATCCCAAA
GTGGTGACAT ATCATCCGCC TGTTGCCCCA AAGGAGAAGG TGTTTTTTAT AGGTATCGGT
TGCAGGCAAT TCAGGGACAC TGCCAATAAC CTTCAATGGA GCGTCGCCGA TGTACAATAC
CTGGCAGATA CACTCAGGAA AAAGCTGGGT GACAACCTTG TCATCGATAC CCTATTCGAT
AGCCACGTGA CACTGGAACG TGTTAGGCAA CTCAAAGAAA CACTGAACAG ATCAGCTGTA
AATGATAAGG TGATCCTGGT ATACTCAGGG CATGGTTTAC TCAGCGGACA ACAATATTTT
CTGTCCACCT ATGACGTTAA CTTCGACAAT CCCGCTTCAG GTGGACTGCC CTACGAGGAG
CTGTACGGCT TGCTGGACAA TATTCCGGCA AGGAGGAAGC TTTTACTGAT CGATGCCTGT
AACAGTGGCG AGCTAGATAC CACTTTACTG GCGCAATACC GGGAAAAAAA GGAATCCTTA
GCCCGGGATA GTATTTTTTC CGTTGAGGGT GTAAAAGGAC CTAAAGTCAG AAATATCGGA
CCCCGTCGTC TGGGCATGGA AAAGTTATAT GAACTGACGC AGGAACTATT TGTAGATGTA
AGAAAAAGCA ACGGCGCGAA TGTAATAGCA GCATCTTCTG CATTCCAGTT TGCCAAAGAA
GACAATAGTC TGAAACACGG CGTATTCACC TTCAGCATCC TGGAAGCATT TCGTAATAAT
GACACCCTCA CACTCAGCCA GTTAAAAAAA ATAGTGGAGA AACGGGTACC TGAATTGACA
AAAGGACTGC AACGGCCAAC CTCCCGGAAT CAGACGATTA ATGGCAACTG GATCGTATGG
TGA
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| Protein sequence | MKRSLLFAIL LFSGSVMAQR PKLVLPIGHA GFINDLSFSK DGKMAVTAGS DRTVKIWDVN
TGLILADCQG HTETVNEVEF SPDNKWIISA SQDQTARIWE VSSGKEKLRL RDKYSIEHVS
VNYDGSRIIT TAVSDYIRLC DGKTGDFICN LLDGKNFWNV EFSPDGKLVV ASSFDDSVYI
WDASTGVPHT IIKENSLFAH FSPGSDLIVT GAVDSSVHIW DVRTGNLVKT CRGSRARLSD
ATFSSDEKQL AVVTTEGDVQ LWDVYTGKLI ADWPDVGLRP TSIEFVQHDK QLLLSTKFEA
AILLDARSGK ILQSFDADLV RFSPDQEKYA VVAQAQATIR NVNDSTSYTS LRGHVSWSVY
ASSDTANKHI AVCYGDGSLR VWSLITGMPE LLLADTAAGI TRTVISPDGR TIAGSSQYGT
ISAWDLASGK LLYNKKCAEK RIGSMVFSHD GKQLLIGSGH KAAIVDAKDG AIRRNFDLHR
DIIYAVAFSR NDSLVATASQ DSTARIWNAR TGEVIREITC SGWALGVDFS HNARQLLVVA
DNEIWVKSVP GAATIMHIAL PLSYGLTGAV FSNDDKYIIT TAESGFVCIY NVSTGKLLHE
LHGSTPAAIA TETRSDNTMD ALALSPDGNK IATGRGDGRV EVWDIHTGKA LFPLLGHTDY
VHFLSFSADG KYLTSLSKDR RAFIWDIKKR QALYSFFPVD RSGFLIQDPE GFYRCSHDAA
KLLHYVIPEN TILGFDQLDI RFNRPDILLA RTDPSDTALI AAYHQAYLKR IRDLRIDTTQ
FSDDYSFPAM EITNRDSINF LQNVDTVQLD LSAEDDDQDL SSVNVWVNEV PIYGANGMAI
TSAEKSTFDT TLTITLSNGV NVIEAAAMNK GGISSYRYPK VVTYHPPVAP KEKVFFIGIG
CRQFRDTANN LQWSVADVQY LADTLRKKLG DNLVIDTLFD SHVTLERVRQ LKETLNRSAV
NDKVILVYSG HGLLSGQQYF LSTYDVNFDN PASGGLPYEE LYGLLDNIPA RRKLLLIDAC
NSGELDTTLL AQYREKKESL ARDSIFSVEG VKGPKVRNIG PRRLGMEKLY ELTQELFVDV
RKSNGANVIA ASSAFQFAKE DNSLKHGVFT FSILEAFRNN DTLTLSQLKK IVEKRVPELT
KGLQRPTSRN QTINGNWIVW
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