| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3433 |
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| Symbol | |
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| ID | 8359599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4276683 |
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| End bp | 4279112 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965606 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003123101 |
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| Protein GI | 256422448 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.560491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA ACTACCTGAA AATTGCCTTC CGCAACCTCC TTAGAAACAA AACCTTCAGT
GTTATCAACA TCGTTGGTTT GTCAGTAGGT ACGGTTTGCT GCCTGTATAT TATCCTGTAT
GTCACCGGAC AGTACAGTTA CGATCAGCAG CACCTCCATG CAGCTGATAT CTACAGGATC
AATTCCAGGA TAACGGTCGA AGGTGTATTC CACGACAATG CCACCAGTTC TCCTCCAATC
GCCCCGGCCA TGAAAAACGA TTTTCCGGAA GTAGAGGAAT ATACGCGGGT CGTGCCGACG
GTCAATCTTG GGGCAGCGCA ACACCTGCTG ACCCATCAGG AAGAAAGTAT ATATGAGCGA
AATGCCGTGT ATGCAGATTC CACCTTTTTC AACGTGTTCA ACTTCCATTT TATATACGGC
ACTCCCCGGA ATGCACTCGC CGATCCTTAT ACGGTCGTAC TCATGAAGAA TACCGCAGAG
AAATTATTTG GCAACAGCGA TCCGGTTGGT AAGACAATAG AAATGTCTAA TGCTTATGGT
AAAAATAGTT TCCGGGTAAC CGGCGTAGTA GACGAACGCC TGGGGAAATC GCATTTAAAG
GCGAATATCT TCATGGCGAT GAACAGCGGG GGAATGGGTG CCTATACGAA AGAAAACAAT
TCCTGGGCAG CCTATAACTA TGTAGCCGCC TATGTCAAAT TGCGACCCGG AACAGATGTC
GCCTCACTGG AAGGAAAACT GCCAACCTTC CTGACACAAT ACGGCGCACA ACAGCTAAAA
GACCATGGTA TGAAAAAGGA GCTGCACCTG CAACAACTGG GCAGCATACA TACCACAAAA
GGCTATGACA ACGAACTGAC ACCTCCCAAC GACCGCTCCT TCCTGAATAG ATTACTACTG
ATCGCCATAT TGATACAGGT GATGGCCTGT ATCAACTTCA TGAACCTGAG TACGGCAAGG
GCGTCTAAAC GTGCAAAAGA AGTTGGCATC AGAAAAGTGA TCGGCGCCAG AATCAATCAC
ATCGTCAGTC AGTTCCTGGG AGAAGCCCTG CTCTTATCCG TATTAGCCAT ATTAGTGTCC
ATCCCTTTAC TGGCCATCCT GCTGCCAGTA TTGAACCGGC TGACAGATGC AGATATTAAC
ATCTTCAGTT TAATGAGCTA TCGCTTTGCT TTCCTGCTCC TGGCTTTTAT ATTCATTACC
GGTCTGCTGG CAGGCAGTTA TCCGGCCTTC TATCTTTCTG CTTTCAGACC AATCAGTGTC
CTGAAGGGCA ATTTCAGCAG CCGACTGTCC TCCGCGGGCA TACGCCGTTT ATTGATCGTC
TTCCAGTTTT CATTGTCAAT CGTCTTCGTC TCTGGTATCA TCATCATTGC CCGTCAGCTG
AATTACTTAA AACAGATGGA TATAGGTTTT GATCGCAATC AGAAATTGGT ATTCAATTTT
CACACCGATG AAGAGAAAAC AAGACTCAAT GCATTCATGA GCGATCTGCG CCAGCTGACC
GGTGTAAAAA CCGTCAGTCA GGCCGACAAT TACCCTAGCC AGAAGATCAG CCATGACTGG
CCTTATTTCC TGGAAGCCGC AGGGGCTGTG ATAGGGAAGG ATGTACAGTT TATCTTTTCT
GACGAAAACT ATATAAAAGC ATTAGGGGTT AAAATGCTTA GCGGAAGAGA TTTCAGGGCG
GGCGATTCCG GAAAGGTGGT GATCAATGAA ACTTTTGCAA AGGCGCTTGG TCTGACTGCC
CTGAACGCAC CCGGCAGAAG ATTATATCCA CAGCATGATG CTGACGAACC AGTCATATTC
GCAGAGATCA TCGGCGTCAT GAAAGACTAT AACAATAACT CCCTCCACGA TGAAGTACAG
CCGCTGATGC TGCGTTACAA TCCTGAAAAC GCCACCAATA ACATCATCGC TGCCGCTGAT
ACCAAAGACT ATCAGCAACT ACTCAAAAAC ATCAATAACG TCTGGCGACG ACATTTCCCG
CAAACGCCTT TTGCCTACAC CTTCCTTGAT GAAGATGTAC AGCAACAATA CGAAGCGGAA
GTCACGCTCT CCAATATCAT CAATGCCTTC ACCCTGATCG CCATCTTCAT CTGTTGTCTG
GGCCTGTTCG GACTGTCCGC ATTTATGGCT GAACAACGAA AAAAGGAGAT AGGCATCCGC
AAAGTACTCG GCGCCAATCT CCTTATATTG GTAACACTCT TATCAAAAGA TTTCCTGAAA
CTGGCAGGTA TCGCCCTTGT TGTCGCCATA CCGGTCGCCT GGTGGGCACT CGATAAATGG
CTGCAAACTT TTGCCTACCG CATCACACCT GGCTGGTGGG AATTTGCCCT GGCCGGTTTT
GTCGTGATGC TGATCGCGCT TAGCACCGTC AGCATACAAG CTATCAGATC AGCTGTCGCT
AATCCGGTAA AAAGTCTGAA AGCAGAGTAG
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| Protein sequence | MIRNYLKIAF RNLLRNKTFS VINIVGLSVG TVCCLYIILY VTGQYSYDQQ HLHAADIYRI
NSRITVEGVF HDNATSSPPI APAMKNDFPE VEEYTRVVPT VNLGAAQHLL THQEESIYER
NAVYADSTFF NVFNFHFIYG TPRNALADPY TVVLMKNTAE KLFGNSDPVG KTIEMSNAYG
KNSFRVTGVV DERLGKSHLK ANIFMAMNSG GMGAYTKENN SWAAYNYVAA YVKLRPGTDV
ASLEGKLPTF LTQYGAQQLK DHGMKKELHL QQLGSIHTTK GYDNELTPPN DRSFLNRLLL
IAILIQVMAC INFMNLSTAR ASKRAKEVGI RKVIGARINH IVSQFLGEAL LLSVLAILVS
IPLLAILLPV LNRLTDADIN IFSLMSYRFA FLLLAFIFIT GLLAGSYPAF YLSAFRPISV
LKGNFSSRLS SAGIRRLLIV FQFSLSIVFV SGIIIIARQL NYLKQMDIGF DRNQKLVFNF
HTDEEKTRLN AFMSDLRQLT GVKTVSQADN YPSQKISHDW PYFLEAAGAV IGKDVQFIFS
DENYIKALGV KMLSGRDFRA GDSGKVVINE TFAKALGLTA LNAPGRRLYP QHDADEPVIF
AEIIGVMKDY NNNSLHDEVQ PLMLRYNPEN ATNNIIAAAD TKDYQQLLKN INNVWRRHFP
QTPFAYTFLD EDVQQQYEAE VTLSNIINAF TLIAIFICCL GLFGLSAFMA EQRKKEIGIR
KVLGANLLIL VTLLSKDFLK LAGIALVVAI PVAWWALDKW LQTFAYRITP GWWEFALAGF
VVMLIALSTV SIQAIRSAVA NPVKSLKAE
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