Gene Cpin_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3430 
Symbol 
ID8359596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4272727 
End bp4273446 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content48% 
IMG OID644965603 
Productcyclase/dehydrase 
Protein accessionYP_003123098 
Protein GI256422445 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGAAA ATTCTTCAAC AGGTAATAAG CCGGCCGTAA ATGTCAATAA TACAGAGCGC 
ATCATCTCTG CCGTAACCGG CGGTTTTCTG CTCCTCAATG CCATTACCGG TAAAAATGCC
CGCTTGCTGA AAGCTGGTGC TGGAGCATTT CTTTTATACC GTGCGGTGAC CGGCAACTGT
CCGGTATATA GCGCCATGAG AAAAAAGCGA CTGCCAGATC CTGCTAAAAA TGTGAATGTG
CGGGTTGCAC TCACTGTCGG CCGCCCCCGC AACGAAGTCT ATGCCTTCTG GAGGAAGCTG
GAAAACCTGC CGCTTTTTAT GAAACATCTT CAATCTGTCA CCGATCTGGG AGGAGGACGT
TATCATTGGG AAGCTGATAT TCCTGGATTG CCTGCGCCTA TCAATTGGGA TGCAGAAATC
ATCAAAGAAG AAGAAGGCAC ACTCCTTGGC TGGAACGCAC TTCCCGGCGC CGATATCGAT
AACGCCGGTA AAGTAACTTT TGCTGATGCT GGAGAAAAAA GCACCGAATT ACAGATTGTA
ATTACCTACA GGGCGCCACT TGGGCCCGCA GGCAGAGGAC TGGCAAAATT GCTGACGCCG
TTATTCGAAT CAATGATAAA AGAGGAGCTC CGTAATTTCA AAAAGTATAT TGAAACCAGC
GGAATAGAAC CTGTCAACGA AGACACTTCC GGCGCCGGAC CAATATTATA TGTAGATTAG
 
Protein sequence
MNENSSTGNK PAVNVNNTER IISAVTGGFL LLNAITGKNA RLLKAGAGAF LLYRAVTGNC 
PVYSAMRKKR LPDPAKNVNV RVALTVGRPR NEVYAFWRKL ENLPLFMKHL QSVTDLGGGR
YHWEADIPGL PAPINWDAEI IKEEEGTLLG WNALPGADID NAGKVTFADA GEKSTELQIV
ITYRAPLGPA GRGLAKLLTP LFESMIKEEL RNFKKYIETS GIEPVNEDTS GAGPILYVD