Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3430 |
Symbol | |
ID | 8359596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4272727 |
End bp | 4273446 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965603 |
Product | cyclase/dehydrase |
Protein accession | YP_003123098 |
Protein GI | 256422445 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAA ATTCTTCAAC AGGTAATAAG CCGGCCGTAA ATGTCAATAA TACAGAGCGC ATCATCTCTG CCGTAACCGG CGGTTTTCTG CTCCTCAATG CCATTACCGG TAAAAATGCC CGCTTGCTGA AAGCTGGTGC TGGAGCATTT CTTTTATACC GTGCGGTGAC CGGCAACTGT CCGGTATATA GCGCCATGAG AAAAAAGCGA CTGCCAGATC CTGCTAAAAA TGTGAATGTG CGGGTTGCAC TCACTGTCGG CCGCCCCCGC AACGAAGTCT ATGCCTTCTG GAGGAAGCTG GAAAACCTGC CGCTTTTTAT GAAACATCTT CAATCTGTCA CCGATCTGGG AGGAGGACGT TATCATTGGG AAGCTGATAT TCCTGGATTG CCTGCGCCTA TCAATTGGGA TGCAGAAATC ATCAAAGAAG AAGAAGGCAC ACTCCTTGGC TGGAACGCAC TTCCCGGCGC CGATATCGAT AACGCCGGTA AAGTAACTTT TGCTGATGCT GGAGAAAAAA GCACCGAATT ACAGATTGTA ATTACCTACA GGGCGCCACT TGGGCCCGCA GGCAGAGGAC TGGCAAAATT GCTGACGCCG TTATTCGAAT CAATGATAAA AGAGGAGCTC CGTAATTTCA AAAAGTATAT TGAAACCAGC GGAATAGAAC CTGTCAACGA AGACACTTCC GGCGCCGGAC CAATATTATA TGTAGATTAG
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Protein sequence | MNENSSTGNK PAVNVNNTER IISAVTGGFL LLNAITGKNA RLLKAGAGAF LLYRAVTGNC PVYSAMRKKR LPDPAKNVNV RVALTVGRPR NEVYAFWRKL ENLPLFMKHL QSVTDLGGGR YHWEADIPGL PAPINWDAEI IKEEEGTLLG WNALPGADID NAGKVTFADA GEKSTELQIV ITYRAPLGPA GRGLAKLLTP LFESMIKEEL RNFKKYIETS GIEPVNEDTS GAGPILYVD
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