Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3428 |
Symbol | |
ID | 8359594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4270594 |
End bp | 4272009 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965601 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003123096 |
Protein GI | 256422443 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAAGAT ACAAGAAATA TGTCCTGGCG ACACTGATGA TAGGCACTTC CATGGCAGCA ATCGACAGCA GTATTGTAAA CGTCTCTCTT CCGGTGATAC AGCGTCAGTT CGATGTGGGC CTGGATGATG TCTCCCTCGT CATTACAGCT TATATGATCA CTTTCCTGCT GTTTATCCCG CTGACCAACT GGTTGAAGAA CAGGGTAGGG TACTATCACC TGTATATGGC AAGTATCATC GTATTTGTGC TGGGTTCGGC TTTGTGCAGC ATCGCAGGAA GTATTGATAT GCTGGTATGG TCGAGGGTAA TACAAGCTGT CGGGGGTGGT TCTATTGCGC CTGTTTCACT GGCGATTCTC TCGGAGAGTT TTCCCCAAGA TGAACGGGGT AGTGCAATAG GATGGTGGGG AATCGGCAAT GTAATGGGAC CAGCACTAGG ACCGACACTC GGCGGTGTAT TAACGGAATA TCTTGGCTGG CAGGCAATCT TCTACGTCAA CATACCCATA GGTATCATCG CGATCCTGAT GAACATGCGC TACCTGAATT TTCTGAAATC ACGTAAACGT TATAGCGAAC CTTTTGACTT TAAAGGATAT TTCCTCTTTA TCTGTTTCAT TATATTACTC CAATTCACGC TGACCAGTAC AAGTGATAAA TTCGGTTTCA CCTCCTGGCA GTTTATCTCG GGTGTCCTGC TGACGGTCTT ATCACTATGG TTGTTCATCC GTTCTTCCCG AAAGCCCTCC GCATTACTGG ATCTCTCCGT ATTCCGCGTT GCGGCTTTCA ATCGTGCCTT TATCATCGTC GCCCTGCGTT CACTGGCCCT GTTTGGCGGG ATGTTTTTCC TTCCCTTTCT CCTACAGGGA TATCTGAAAT ATACAGAAAT TCAAAGTGCG CTCCTGATAT TACCTAATGC GCTTGTTATG CTGCTGACAA GACCGCTGGC AGGTAAAATG GCAGATGCCG GAGAGATCAG GAATATCTCC GTATTTGGTA TTGTACTGGT GTCCGCATCT TTCTTCCTCT TTGCGCAGAT CAATACGGGA ACGCCCGTCT GGTTTATTGT CTTATCCATG ATTGTACGCG GGTTGGGGAT CAGTTTCCTG ATAGCGCCGG TTTCAACAGC GATGTTAAAC GCTGTAAGCC CGTCACAGAC AGCCACCGCC ACATCCTTAA ACAGCCTGAT GTTACAGTTA GGAGGCTCCG TCGGTATTGC AATCAGCGGT TCCATGCATA CTTACATCAA TGATCACTAC CTGGCTAAAG GATACGATAC AATGCTGGCA GAACACTATG CATTGAGGGA TGGATTTCTT TTTACGGCCG TATTGATGCT GGTGACTTTA ATCCCGGCGT TCAAACTACC GCACAAGGTA GAGCGGGAAC TGAAGCACAA GGAAGCATTG GGATAA
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Protein sequence | MLRYKKYVLA TLMIGTSMAA IDSSIVNVSL PVIQRQFDVG LDDVSLVITA YMITFLLFIP LTNWLKNRVG YYHLYMASII VFVLGSALCS IAGSIDMLVW SRVIQAVGGG SIAPVSLAIL SESFPQDERG SAIGWWGIGN VMGPALGPTL GGVLTEYLGW QAIFYVNIPI GIIAILMNMR YLNFLKSRKR YSEPFDFKGY FLFICFIILL QFTLTSTSDK FGFTSWQFIS GVLLTVLSLW LFIRSSRKPS ALLDLSVFRV AAFNRAFIIV ALRSLALFGG MFFLPFLLQG YLKYTEIQSA LLILPNALVM LLTRPLAGKM ADAGEIRNIS VFGIVLVSAS FFLFAQINTG TPVWFIVLSM IVRGLGISFL IAPVSTAMLN AVSPSQTATA TSLNSLMLQL GGSVGIAISG SMHTYINDHY LAKGYDTMLA EHYALRDGFL FTAVLMLVTL IPAFKLPHKV ERELKHKEAL G
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