| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3420 |
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| Symbol | |
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| ID | 8359586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4256070 |
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| End bp | 4257734 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644965593 |
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| Product | cyclic peptide transporter |
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| Protein accession | YP_003123088 |
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| Protein GI | 256422435 |
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| COG category | [P] Inorganic ion transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00388229 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTA TTAGATTACT GAAGTATAAA TCAGGCAGTT TTTTTGTCAT GATCGCTTTG
CTGGGAATTG TAAATAGCCT GGTATATGGC AGCATCATGG TGTTCATAAA CAATGTTATC
GCCGGTGTGG GGCTGCCCTT CATAGCAGCC CCGCAAAGCT GGATATACGC CGGATTATTG
GTAGTATCAT TCCTGTTGAA TAAAACCTTC CAGACTTACA TCGCAAGATT GACAAACAGT
ATCGTGTTTG AATATGAGTC CGGGGTTATC GATAAACTCA GGGTATCTAC CTTTGAGTCT
TTCGAAAAGC TAGGCGCGCA AAGAGTGTAC ACCGCCATAC AGGACACCCG CCTGTTGGCA
CAGGTGCCCT CTAACTTCGT GAATGCCGTC AATTCTGTCG TCATCATTTT ATGCGGCCTG
TCCTACATGT TCTGGCTGTC CTGGAAAGCA GGAGCGATGA TCCTGTGCTT TATGGGATTG
CTGCTCGCCT TTTATCTGCT CCGCAACAAC TCCATAGAGA AGCAGTTAAA CGAGGTACGC
GACCTGCAGA ATGATTATCA CCGCTATCTG CGTGACTTCC TCAACGGCTT CCGGGAAATA
AAAATGAGTC TGAACAGAAA CAATAGTATC TATGATCGCT ATATCAAACG CACGCTGCAG
GGTAGTAAAG AACTAAATGA CCGTACGGCT GTACGTTATC TCGTCAACGA ACTGACAGGT
AACTATAGCT GGTACATCGT ACTCGGATTG ATACTGTTTG TCATGCCGCA GGTATTAAGC
ATTCCAACAG CCCGTGTGAC GGCCTTTGTG TTTACCATTC TTTACATTAT GGGGCCGCTT
GCTACACTTA TATCTTCGGT ACCTTTCTTT ACCCGCCTGA AGATAGCAGT CGAAAGGATC
GACGGACTGG AAAAAGAAAT AGACACTTAT CCGCAGTATA ATCTGGAAGA ACAATCCATT
GAATTGTCCC GCGACTTTAC AGATCTCGAA TTCAGCAATG CGGTGTATGA ATACAAAGAC
GCTGCCGGCA AAAAACTTTT CGCTGCCGGT CCGTTTAACA TCTCCATCAA AAAAGGAGAG
ATCATATTCG TAACTGGAGG GAACGGTAGT GGTAAAAGCA CCTTTATTAA TCTGCTGACG
GGTATCTATA TGCCAACACA AGGTTCCCTA CGCTATAATG GAGAAGCGCT TGTCATGAAT
AGCTACCCGC ATTACAGTGA CCGTCTGTCA TCCATCTTTA CCGGTGTTTA CCTCTTCAAC
GAAAATTACG ACGGTTTTGA CCTGGATGAA AATAACCCCG TCTTACAGAA ATATCTGGCC
ATGATGGAGC TGCAGGATGT TGTACGGTTC GACGCACAAA AGAAATCCAT AGACAATAAG
TTGTCTATGG GTCAACGTAA ACGACTCGCC CTGATCTACG CATTGATGGA AAACAGGGAT
GTGATGGTGC TGGATGAATG GGCTGCCGAA CAGGATCCGC ACTTCAGAGC ATACTTCTAC
GAACAGATCA TCCCAGTATT AAAACAAATG AATAAAACAG TCATCGCCGT CACCCATGAT
GATAAATACT ACGGACAGGC AGACCGCATT CTGCACTTCG ATTTTGGTAA AGTAGCCAAA
GATGTGAAAC TCCAACATGC AAAACAACCC GAACTCGTAA AATAA
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| Protein sequence | MNLIRLLKYK SGSFFVMIAL LGIVNSLVYG SIMVFINNVI AGVGLPFIAA PQSWIYAGLL
VVSFLLNKTF QTYIARLTNS IVFEYESGVI DKLRVSTFES FEKLGAQRVY TAIQDTRLLA
QVPSNFVNAV NSVVIILCGL SYMFWLSWKA GAMILCFMGL LLAFYLLRNN SIEKQLNEVR
DLQNDYHRYL RDFLNGFREI KMSLNRNNSI YDRYIKRTLQ GSKELNDRTA VRYLVNELTG
NYSWYIVLGL ILFVMPQVLS IPTARVTAFV FTILYIMGPL ATLISSVPFF TRLKIAVERI
DGLEKEIDTY PQYNLEEQSI ELSRDFTDLE FSNAVYEYKD AAGKKLFAAG PFNISIKKGE
IIFVTGGNGS GKSTFINLLT GIYMPTQGSL RYNGEALVMN SYPHYSDRLS SIFTGVYLFN
ENYDGFDLDE NNPVLQKYLA MMELQDVVRF DAQKKSIDNK LSMGQRKRLA LIYALMENRD
VMVLDEWAAE QDPHFRAYFY EQIIPVLKQM NKTVIAVTHD DKYYGQADRI LHFDFGKVAK
DVKLQHAKQP ELVK
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