| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3380 |
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| Symbol | |
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| ID | 8359546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4142069 |
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| End bp | 4145236 |
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| Gene Length | 3168 bp |
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| Protein Length | 1055 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644965553 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003123048 |
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| Protein GI | 256422395 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.176631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTACG TTGAATTACA GGTGACCAGC AATTTCAGCT TCCTGCGCGG CGCTTCCCAC
CCGGATGAAC TGGTGGAACA GGCAGCGGAA TATGGTTACA AAGAGATTGC TATTACTGAC
CGGAATACAC TGGCAGGTAT TGTGCGGGCA CATGCTGCAG CTAAAGCAAA AGGGATCCGG
ATTATTCCCG CCTGCAGACT GGATTTACAG GATGGTCCTT CTCTCCTGGC TTATCCCACC
GATCAGGCGG CCTATAGCCG ATTATCGTCC CTGTTAACCA CCGGCAATCT ACGGGCAGAA
AAAGGGGATT GCCTCCTCTA CAAAAAAGAT GTGTATGCCT ACGCAGCGGG CATGATTTTC
ATCGTAGTAC CACCAGAACA ACTCAATACT AAATTTGACT TCGAAACCGC TTTCAAAAAC
GATCTCAAAG AATACAAGGA CAAACTGGGA TCACAACTCT ACCTCTCTGT TACCCGCTCC
TATCTGGGAG ACGATCACAA AAGGCTCTAC CGGCTGGCGC AACTATCTGC ATTATATCAT
ATTCCGCTGG CAGCTACCAA TGACGTACAT TATCATCATC CTGAACGACG GCAGTTACAG
GATATCCTGA CCTGTGTAAG GGAAAAATGT ACCATCTACA ATGCCGGCTT CCGTTTACAC
CAGAATGCAG AAAGACATTT AAAAACACCG GCAGAAATGC AGCGGTTGTT CCGCCAGTAT
CCTGAAACCA TCAGCAATGC ACGACATATC GCAGATGCCT GCCGGTTTAC ACTGGAAAGC
CTGAAATATG TCTATCCGGA AGAACTGACT ACAGAAGGCC GTACGCCACA GGAAGAACTG
ACCTATCTGT CCTGGGAAGG TGCGAAAGAG CGGTTTGGCG ACGATATTCC GGAAAAAATC
TCCTCTGCGA TCAGCTATGA ACTGACATTC ATAGAAGAGA TGAATTATGC CGCTTATTTC
CTGACGGTGC ATGACATTGT ACGTTTTGCC CGAAGTCAGC ATATCTTGTG TCAGGGACGT
GGTTCTGCCG CGAATTCCAC GGTCTGTTAT GTATTGGGAA TTACTTCTGT GAATCCGACT
AAAATCGATC TCTTATTTGA AAGATTCATT TCTTCTGCCC GTAATGAACC CCCGGATATT
GATGTAGACT TTGAACACGA ACGCAGAGAA GAAGTGATGC AATACGTCTT CAACAAATAT
GGCCGGGACA GAGCAGCCAT CGTCGCTACC GTTACACAAC AACACCAGAA GGGCGCCATC
CGCGATGTCG GCAAAGCGAT GGGATTATCC GTAGATACCA TCAACCGCAT GTCTACGTCT
ATCTGGCGGT ATACGGATGA ATGGTTTGAT GAAGGACGCT TGCTGGAACA TGGTCTGAAT
CCGGAAGATC CACACCTGAA AAAAGTATTG GCACTGACAA AACAGATGAT GGGATTTCCG
AGACAGCTGG GACAGCATAC CGGTGGCTTT GTAATTACAC AAGGAAAACT GCATGAACTC
TGTCCGATAC TCAATGCCCG TATGGAAAAC AGGACGTGTA TAGAATGGAA TAAGGATGAT
ATCGATACAC TGGGATTCAT GAAGATTGAT GTACTGGCAT TGGGGATGCT GACCTGTATC
AGAAAGGCCT TTGACCTGGC AAAACAGCAT TATGGAAAAG ATTATACGCT GGCGAATATT
CCTGAAGATG ATCCTGCTGT GTATGAAATG ATCAGTCATG CAGATACAAT TGGTGTATTC
CAGATTGAGA GTCGTGCGCA ACAGTCGATG TTACCACGGC TACGACCACA AAGGTTTTAT
GACCTGGTAA TTGAAGTAGC AATCGTACGT CCGGGTCCTA TTCAGGGAGA CATGGTGCAT
CCTTATCTGC GGCGGCGGAA CGGACAGGAA GCGCCGGATT ATCCGCCACA ACTGGAAGAT
ATCCTGAAGA AAACACTCGG CGTCCCACTC TTCCAGGAAC AGGCTATGAA CATCGCCATT
AAGGCCGCCA GTTTCACGCC AACAGAAGCA GATGAGTTAC GCCGTAGTAT GGCTACTTTC
AGATTGAATG GCGTCATTGA AAAGTTTGAG AAAAAACTCA TTGATGGTAT GACGGCCAAT
GGCTATGAAC TGGACTTCGC GCAACGTATC TTCAAACAGC TGAAAGGGTT CGGTAGCTAT
GGATTCCCGG AAAGTCATGC TGCCAGTTTT GCCTTGCTGG TCTATGTTTC TTCTTATCTC
AAGTGTTATT ACCCCGATGT TTTTGCGTGT GCATTATTGA ACAGTATGCC CATGGGTTTC
TATCAGCCGG CTCAGATAGT GAGCGATGCG CGTGCACATC ATGTGGAGGT CAGACCGGTG
GATATTAATC ATTCCAGCTG GGATAATACA CTGGAAGAAA AAGAGACGAT TCCTCATGCA
TTACGCTTAG GCTTTCGCCA GGTAAAAGGC TTAAACCAGG AAGAAATGGA CGTCTTATTA
TCCGCCAGGA AAAAAGGCAT TACCAGTATC CTGGCTTTAC GGGAAGCTGG TGTATCGCAG
ACGGCCTTGG AAAAACTGGC AGATGCGGAT GCCTTCCGGT CCATTGGTCT TGACAGGCGA
AGGGCATTAT GGGAAATATC CTCTTTACAT GACCGGCCTA TCGGTCTGTT TACCGGACAA
GCATCTGAAA GCACCGTAGA ACAGCCCGTT GACCTGCCTG AAATGTCTGC ACCGGAACAT
GTGGTACAGG ATTATAATGC AATGGCTCTA TCCCTCAAAG CACACCCGGT AAGCTTCGTG
AGAGAAAAAC TGAGTCTGTT ACATGTAACG TCGGTGAAAG ATCTGGCGAC AATACCGGAT
GGAATGCCGG TAAAAGTGGC AGGTCTGATA TTGGTGCGAC AAAGACCCGG TACAGCCAGC
GGGGTCTGTT TTATTACCAT AGAAGACGAG ACGGGTTGTG CAAACCTCGT AGTATTTAAC
CAGTTGTTCG AAAAGTACCG GAAAGAGATA TTACAGGCCA GGTTACTGAT GGTAGAAGGG
AAAATGCAAC GGGAAGGTGA AGTGGTGCAT GTGGTGGTGA GACAATGTTA TAACCTGAAC
AGGTTGTTGC AGCAGATGAC GGCGGTGGAA GACGTAACGG TGAAACAGTT GGAAATAAAG
GCAGGTACTG AAGAATTGAA GTTGCCCGGA GCGAGGAATT TCAGGTAG
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| Protein sequence | MHYVELQVTS NFSFLRGASH PDELVEQAAE YGYKEIAITD RNTLAGIVRA HAAAKAKGIR
IIPACRLDLQ DGPSLLAYPT DQAAYSRLSS LLTTGNLRAE KGDCLLYKKD VYAYAAGMIF
IVVPPEQLNT KFDFETAFKN DLKEYKDKLG SQLYLSVTRS YLGDDHKRLY RLAQLSALYH
IPLAATNDVH YHHPERRQLQ DILTCVREKC TIYNAGFRLH QNAERHLKTP AEMQRLFRQY
PETISNARHI ADACRFTLES LKYVYPEELT TEGRTPQEEL TYLSWEGAKE RFGDDIPEKI
SSAISYELTF IEEMNYAAYF LTVHDIVRFA RSQHILCQGR GSAANSTVCY VLGITSVNPT
KIDLLFERFI SSARNEPPDI DVDFEHERRE EVMQYVFNKY GRDRAAIVAT VTQQHQKGAI
RDVGKAMGLS VDTINRMSTS IWRYTDEWFD EGRLLEHGLN PEDPHLKKVL ALTKQMMGFP
RQLGQHTGGF VITQGKLHEL CPILNARMEN RTCIEWNKDD IDTLGFMKID VLALGMLTCI
RKAFDLAKQH YGKDYTLANI PEDDPAVYEM ISHADTIGVF QIESRAQQSM LPRLRPQRFY
DLVIEVAIVR PGPIQGDMVH PYLRRRNGQE APDYPPQLED ILKKTLGVPL FQEQAMNIAI
KAASFTPTEA DELRRSMATF RLNGVIEKFE KKLIDGMTAN GYELDFAQRI FKQLKGFGSY
GFPESHAASF ALLVYVSSYL KCYYPDVFAC ALLNSMPMGF YQPAQIVSDA RAHHVEVRPV
DINHSSWDNT LEEKETIPHA LRLGFRQVKG LNQEEMDVLL SARKKGITSI LALREAGVSQ
TALEKLADAD AFRSIGLDRR RALWEISSLH DRPIGLFTGQ ASESTVEQPV DLPEMSAPEH
VVQDYNAMAL SLKAHPVSFV REKLSLLHVT SVKDLATIPD GMPVKVAGLI LVRQRPGTAS
GVCFITIEDE TGCANLVVFN QLFEKYRKEI LQARLLMVEG KMQREGEVVH VVVRQCYNLN
RLLQQMTAVE DVTVKQLEIK AGTEELKLPG ARNFR
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