Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3376 |
Symbol | |
ID | 8359542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4138842 |
End bp | 4139690 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644965549 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003123044 |
Protein GI | 256422391 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.125379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATG TATTGAAGCA GTTCTTCTCC AAGAAATTCG GATATATAGA TTTTGATGCC GATACGGCAG ACGATCTCCT CTACGAGGAG TATAATTCTT TTATTAAAGT ACTCTTTATG GAAGCGGGAT CGGAAGTGAT GGTGGATTTT AAGGAATACA AACTGGAAAA GGACGCGCTT TTCTTTATTA AAGACGGACA ATGGTACAAG TGTGCCGGTA AGGGTACGCT ATTATATTAT AACCGTGACT TCTACTGTAT CCAGATACAT GATGCCGAGG TGGCGTGTGA TGGTTTGTTA TATAACAATG TATATGACGT ACCGGTTGTG TACCTGGATG GAGAGGCTTC CCGGCAGACC AGACACATAT TGGAGGAAAT AAAGATGGAG GCGGTCAGTT CGGAAAGCAG TACCGAAGAA ATGATCAGGA TTTTCCTGAA ACAGCTGATC ATCCGCTCTA CCCGTATGTG GAAGAAAACG CATGACATGG CCGACAACAG CGTCACACAG GAAGTAGAGT TCCTGCGGAA ATTCAGTCAG CTGGTAGAAG CACATTATAT TAAACACCAC AACGTAGCCG ACTATGCAGA TATGCTGAGC ATTACCCCCA AAGCGCTCAG TAAGAAAATA TCCAAGTACA GTGCTAAAAG TCCGAATGAT ATCATTAAAG ACAGGATCAT CCTGGAAGCA AAACGCCTGC TGATACATAC TGATCTCAGT GTAAAAGAGA TCGGTTATAA GCTGGGATAT GAAGATCCGG CGTACTTTGT ACGTTTATTT ACCAATCAGA CGGAGAGTTC TCCCCTGCTC TTCAGAAAAA AATACGCAGA AGGAGAAAAA GTACAATAA
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Protein sequence | MENVLKQFFS KKFGYIDFDA DTADDLLYEE YNSFIKVLFM EAGSEVMVDF KEYKLEKDAL FFIKDGQWYK CAGKGTLLYY NRDFYCIQIH DAEVACDGLL YNNVYDVPVV YLDGEASRQT RHILEEIKME AVSSESSTEE MIRIFLKQLI IRSTRMWKKT HDMADNSVTQ EVEFLRKFSQ LVEAHYIKHH NVADYADMLS ITPKALSKKI SKYSAKSPND IIKDRIILEA KRLLIHTDLS VKEIGYKLGY EDPAYFVRLF TNQTESSPLL FRKKYAEGEK VQ
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