| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3368 |
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| Symbol | |
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| ID | 8359534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4129142 |
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| End bp | 4131061 |
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| Gene Length | 1920 bp |
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| Protein Length | 639 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965541 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_003123036 |
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| Protein GI | 256422383 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.338495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.193893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATATA AGCACCTGAA ACACTTTATA GACACATTAG AAAAGGCAGG AGAGCTGATA
AGGATCAAGA CTTATGTAGA CCCTAAGCTG GAGATCGCAG AAATTACCGA CAGGGTAAGT
AAATCGCCCA ACGGAGGTAA AGCGCTGCTG TTCGAAAACA CAGGTTATGA TTTCCCTGTA
CTGATCAATT CCATGGGCAG CTACAGGCGC ATGTGTATGG CGCTGGGCGT ACAGGAATTA
GACGATGTGG CGAATGAGAT CGAATCCCTG GTGAAATTAT TATCAAAGCC GAAAGAAGGT
ATTCTCGATA AACTGGCCAT GTTGCCAAAA TTGGGTCAGT TTGCCTCCTG GATGCCGAAA
GTCGTAAGCG GAAGAGGCGC CTGCCAGGAA GTGATCATGA GCGAACCGGA CCTCAGCAAG
ATACCGGTTA TGCAGTGCTG GCCGAAAGAT GGTGGTCCTT TTATCACCCT TCCCGTTATT
CATACCAAAG ACCCGAATAC CGGTACCCGC AACGTGGGCA TGTACCGTAT GCAGGTGTTC
GATAAAACCA TGACAGGTAT GCACTGGCAC AAACACAAAG TGTCCGCCAA GCACTTCATG
GAATATAAAA AACTCAAGAA ACGTATGCCG GTTGCGGTGA TTCTAGGTGG AGATCCCGCA
TATACCTATT CCGCTACTGC GCCACTTCCT GAAAATGTGG ACGAATACAT GCTGGCAGGT
TTCCTGCGTA AGCAGAAAGT AGAACTGGTC AAATGTATCA CCCAGCCGGA AATTGAAGTC
CCTGCAGATG CTGACTTCGT GATAGAAGGC TACGTAGATC CGGAAGAAGA GCTGATCTGG
GAAGGGCCAT TCGGCGACCA TACCGGTTAT TACTCACTGG CCGACTGGTA CCCGCGCTTC
CACGTAACTG CCATTACGCA CAGAAAAGAC GCCATCTATC CGTCCACCAT CGTAGGTATC
CCTCCGCAGG AGGACGCCTG GATCGGAAAA GCGACAGAAA GGGTGTTCCT GGCGCCGATC
AAAATGACAA TGGTTCCCGA AATGATAGAT ATGGAAATGC CGGTAGAAGG CGTATTTCAT
AACCTGGTGA TCGCACAGAT CAAAAAGGAC TATCCGGGAC AGGCACAGAA AGTGATGAAT
GCCATGTGGG GCGCCGGACA AATGATGTTC AACAAAATAC TGGTCGTTGC GGATGAACAT
ACCAGTATCC AGAACTATAA AGAACTCGCG CAGTATGTAT TCAAACATCT GAACCCTGCT
ACGGATATCT ACCTTAGCCA GGGCCCGATG GACGTACTGG ACCACTCCTG TTCTAAAATG
GGCTTCGGTG GCAAGATGTG TATCGATGGC ACCCGCAAGT ATGAGGAAGA GATTGAATCA
GCACTGATTA CTACTGATCA GACTTTCAGC CGTGAGAACG TCATGAAACG TTTCCCTGAG
ATCAGGGATA TCAATGATTC CCTGCTGAAA GAAAATATTC CATGTATCCT GGTATCCGTA
GAAAAAGCAC GTCCGCTGCA TATCAAGGAA TTGACAGAGC AATTATACAA TCTGCCGGAT
CTCAGCAATG TAAAAATGGT TCTCTTCGTA GAACATACCG TTGATGTACA GGATCTGCCT
TCTGCACTCT GGCGTTTCTG TAACAACCTG GATCCTCGTC GTGACAGCTT TATCGTACGC
CCGGCAGTAC CTGGTCATCC GGGCAAAGTA GGCGCCGGTA TCGGTATGGA TGGTACCCTG
AAAACCCGGG CGCTTGACAA TTTTGAACGT GACTGGCCAA ATATCATTGT TGCAGATGAT
GCTACCATCA GGATCATTGA TGAAAAGTGG GCATCACTCA ACCTCGGACC TTTCATTCCT
TCTCCTTCTC ATAAATATAA ACCACAGATG TATGGAGAAG AAGCAGTTGT TCCGCAATAG
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| Protein sequence | MAYKHLKHFI DTLEKAGELI RIKTYVDPKL EIAEITDRVS KSPNGGKALL FENTGYDFPV
LINSMGSYRR MCMALGVQEL DDVANEIESL VKLLSKPKEG ILDKLAMLPK LGQFASWMPK
VVSGRGACQE VIMSEPDLSK IPVMQCWPKD GGPFITLPVI HTKDPNTGTR NVGMYRMQVF
DKTMTGMHWH KHKVSAKHFM EYKKLKKRMP VAVILGGDPA YTYSATAPLP ENVDEYMLAG
FLRKQKVELV KCITQPEIEV PADADFVIEG YVDPEEELIW EGPFGDHTGY YSLADWYPRF
HVTAITHRKD AIYPSTIVGI PPQEDAWIGK ATERVFLAPI KMTMVPEMID MEMPVEGVFH
NLVIAQIKKD YPGQAQKVMN AMWGAGQMMF NKILVVADEH TSIQNYKELA QYVFKHLNPA
TDIYLSQGPM DVLDHSCSKM GFGGKMCIDG TRKYEEEIES ALITTDQTFS RENVMKRFPE
IRDINDSLLK ENIPCILVSV EKARPLHIKE LTEQLYNLPD LSNVKMVLFV EHTVDVQDLP
SALWRFCNNL DPRRDSFIVR PAVPGHPGKV GAGIGMDGTL KTRALDNFER DWPNIIVADD
ATIRIIDEKW ASLNLGPFIP SPSHKYKPQM YGEEAVVPQ
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