Gene Cpin_3356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3356 
Symbol 
ID8359522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4121259 
End bp4121588 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content45% 
IMG OID644965529 
Productiron-sulfur cluster assembly accessory protein 
Protein accessionYP_003123024 
Protein GI256422371 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0224722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.165998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACAG TATCAGAAAA AGCAGGCGAA TATATAAAGG ACCTTATGGT CAAGGAGAAC 
CATGCTCCCG GTACTTTCGT ACGCGTTGGC GTAAAAGGTG GCGGTTGTTC AGGACTGGAA
TATGTGTTGA AGTTTGAAAG TTCAGAGCAT GAAGAAGGCG ATCAGACCTT TGAAGATAAA
GGTGTTAAAA TTGTGGTGCA GATGAAGAGC CTCCTGTACC TGTATGGCAC CGAGTTGGAT
TATTCCGATG GTCTCAACGG CAAGGGGCTT TATTTCAACA ACCCGAATGC TACCCGTACC
TGTAGCTGTG GGGAAAGCTT TGCGGTATAA
 
Protein sequence
MITVSEKAGE YIKDLMVKEN HAPGTFVRVG VKGGGCSGLE YVLKFESSEH EEGDQTFEDK 
GVKIVVQMKS LLYLYGTELD YSDGLNGKGL YFNNPNATRT CSCGESFAV