| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3353 |
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| Symbol | |
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| ID | 8359519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4117624 |
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| End bp | 4118943 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965526 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_003123021 |
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| Protein GI | 256422368 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.315462 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCG ATAAATCATT CTACGAATTT ATATCCAATG GGGTACCCGG ACCTGAGCAG
AAAGTGGATG CGGACAACGC AATCATGCCT GCACGTAAGC TGGCTTTCAG CCGCTTCAAG
GAACTGGGTC TGCCTACCAT TAAAACAGAA GAGTGGCGCT ATACCAACGT ACAGCGCTTC
CTGAAAGATG CTTTCACCCT GGCACAGGAA GAACAGGTGA CTGTAACACC TGATCAGCTG
AAAGCTGCCA ACATCCCTCA ACTGGACAGC TACCGCGTTG TACTGGTGAA CGGACGTCTG
CAGGCGGATC TTTCCGAACT GCCAGCTGGT GGTAAAATCA CCGTTTCCAA ACTGAGCGAT
GCAGCCGGTA ATACACAGCT GCAGGCATGG TTTGACAAAC ACCCCCATCT TCAGTCACAG
CCATTCGCTG CACTGAATGC TGCACTGTTT GCCGACGGTC TCTTTATCGA GGCAGGTGTT
AATGCAACGC TTGACAAACC TTTACAGATC ATTCACGTAT ATACAGCTTC TGCTAACGCC
TTTATTCAGC CACGCCACCT GGTGGTGCTG CATAAAAGCG CTACCCTGGA AATCATCGAA
AGCGCTGTAG GTCTCAATGA CTCCGCCATC GCTTTCGTAA ACGCAGTAAC AGAAGTGGTA
CTGGAAGAAA ATGCGGAACT CTGGCACTAC AACATCCAGA GCACCATCAA AAACAGCCGC
CACATCTATC ATACTTCTGC TACCCAGAAA GCTGATAGCC GTTATCATCA CTTCAATTTC
ACCCTGCCTT CCGCAGAACT GACCCGTAAC AACCTCAGCG TAGCGCTGAC AGGCAGCAAT
ACGGAAACCA ATCTGCACGG CCTTTACCTT GCTACAGGCA GCCAGCACGT GGATAACCAC
ACCTTCGTGG ACCACCTGGT ACCAAACTGT AACAGTAATG AGCTGTATAA AGGCGTACTG
CTGGACGACG CTAACGGTGT ATTCACCGGC AAAATCCACG TACACCAGGA TGCGCAGAAA
ACAAACGCTT TCCAGCAGAA CAACAACCTG CTGATGAGCG AAAAGGCCAA CATCAACTCT
CAGCCACAGC TGGAAATATA TGCAGATGAT GTGAAGTGCA GCCACGGTTT TACCGTAGGA
CGCTTCAGCG AAGAATCGCT CTTCTACCTG CGTTCCCGTG GTATTGGTGA AGAAGCCGCC
AAGTCACTGC TGGTGAATGC ATTTGCATTT GACATTACCG ATCAGGTACA CATACCGGCA
TTACAGGATT TCCTCGCAGA AAAGATCCGC CAGTATGTAG CCGGCGCTAT CAATAACTAA
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| Protein sequence | MTSDKSFYEF ISNGVPGPEQ KVDADNAIMP ARKLAFSRFK ELGLPTIKTE EWRYTNVQRF
LKDAFTLAQE EQVTVTPDQL KAANIPQLDS YRVVLVNGRL QADLSELPAG GKITVSKLSD
AAGNTQLQAW FDKHPHLQSQ PFAALNAALF ADGLFIEAGV NATLDKPLQI IHVYTASANA
FIQPRHLVVL HKSATLEIIE SAVGLNDSAI AFVNAVTEVV LEENAELWHY NIQSTIKNSR
HIYHTSATQK ADSRYHHFNF TLPSAELTRN NLSVALTGSN TETNLHGLYL ATGSQHVDNH
TFVDHLVPNC NSNELYKGVL LDDANGVFTG KIHVHQDAQK TNAFQQNNNL LMSEKANINS
QPQLEIYADD VKCSHGFTVG RFSEESLFYL RSRGIGEEAA KSLLVNAFAF DITDQVHIPA
LQDFLAEKIR QYVAGAINN
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