Gene Cpin_3350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3350 
Symbol 
ID8359516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4115513 
End bp4115830 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content45% 
IMG OID644965523 
Productprotein of unknown function DUF59 
Protein accessionYP_003123018 
Protein GI256422365 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR02945] FeS assembly SUF system protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.10795 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA ATACAATGAC CTTACGCGAT AGGATTGAAG AGGTACTGCG CACAGTATAT 
GACCCGGAAA TTCCGGTGAA TATATTAGAG CTGGGTCTTG TCTATGAAAT CAGAATAGGC
GAGAATAACC GCATCGGCAT CACGATGACA CTGACTGCTC CGGGTTGTCC TGTGGCAGGC
GATATCATCC GTGAGGTAGA CGAAAAAGTA AGAGATATAG ACGGCGTATC CGATGTAGAT
GTAACACTCA CTTTTGATCC ACCATGGAAC AAAGAAATGA TGAGTGAAGA AGCCAGATTA
GAACTGGGCT TCATGTAG
 
Protein sequence
MSENTMTLRD RIEEVLRTVY DPEIPVNILE LGLVYEIRIG ENNRIGITMT LTAPGCPVAG 
DIIREVDEKV RDIDGVSDVD VTLTFDPPWN KEMMSEEARL ELGFM