Gene Cpin_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3337 
Symbol 
ID8359503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4101686 
End bp4102252 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content46% 
IMG OID644965510 
ProductCheB methylesterase 
Protein accessionYP_003123005 
Protein GI256422352 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00483295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGGCTC TTCCCAAACT GCTGGTGATA GGCGGCTCTG CAGGCAGTCT CGACGTACTG 
TTGCAACTGT TGCCTGAGCT GGAACCCCAA TGGCCACTGG CAATGATCAT CGTATTACAT
CGTAAGAATG ATAACGATAC CCTGCTGACA GAACTGCTGT CAGTTAAAAC GGTATTGCCT
GTAAAAGATG CGGAAGAGAA AGATATATTG ATGCCGGGAT GTATCTATGT AGCGCCTTCG
GATTATCATT TATTGATAGA ACCTGATGGC TCACTTACGC TGGATGCCTC TGAAAAGGTA
CATTACAGCC GGCCGAGTAT TGACGTTACT TTTATGTCGG CCGCAGAGGT ATTTGCTGAA
CGCTTATATT GTATTCTTTT GTCCGGCGCT AATATGGACG GTTCCGAAGG ATTACAGGCT
GTTCATGACC TGGGAGGTTT TACCGCCGTA CAGGATCCTG CCAACGCGGA AGTGGCTTTT
ATGCCTCGTT ATGCGATGAA TAATGTTCCT GTAGATAAAG TCTTAAATAT CCGTGAACTG
GTAGCCTTTG TAAAAGACCT CTGTTAA
 
Protein sequence
MTALPKLLVI GGSAGSLDVL LQLLPELEPQ WPLAMIIVLH RKNDNDTLLT ELLSVKTVLP 
VKDAEEKDIL MPGCIYVAPS DYHLLIEPDG SLTLDASEKV HYSRPSIDVT FMSAAEVFAE
RLYCILLSGA NMDGSEGLQA VHDLGGFTAV QDPANAEVAF MPRYAMNNVP VDKVLNIREL
VAFVKDLC