Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3332 |
Symbol | |
ID | 8359498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4095537 |
End bp | 4095989 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644965505 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003123000 |
Protein GI | 256422347 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.116904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00204772 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATTG AACAAGCTAT TAATCAGCGG AAGTTCAAGG ACGACTATCA TAAGATCGTA GTAAACCTGT TGTTCACAGG TAACTGGCTA CGTGACGCCC TTGGAGCCAA CCTGAAAGAA CACGGATTGT TGCCGCAGCA CTACAATGCC CTGCGCATCA TCAAGGGACG CCATCCGGAC CCTGTGTCAG CCGGCGATAT CAAAGACGTC ATGCTTGATA AAGCAAGTGA CGTAACCCGT TTGCTGGACA AACTCGAAAA ACTTGAGTAC GTACAGCGCC GCCTTTGCCC ACATAACAGA CGAAAAATGG ACATCAATAT CACGCCACAG GGACTGAAAC TCCTATCCGA CGTAGATGTA TTGATGGATA CTTTTTATGA TGATCTGGCA GACAGGATCA CAGCCGCTGA AGCTGCTGTA CTCAGCGATC TGCTCGATAA AGTACGGGGA TAA
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Protein sequence | MKIEQAINQR KFKDDYHKIV VNLLFTGNWL RDALGANLKE HGLLPQHYNA LRIIKGRHPD PVSAGDIKDV MLDKASDVTR LLDKLEKLEY VQRRLCPHNR RKMDINITPQ GLKLLSDVDV LMDTFYDDLA DRITAAEAAV LSDLLDKVRG
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