Gene Cpin_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3332 
Symbol 
ID8359498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4095537 
End bp4095989 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content48% 
IMG OID644965505 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003123000 
Protein GI256422347 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.116904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00204772 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGATTG AACAAGCTAT TAATCAGCGG AAGTTCAAGG ACGACTATCA TAAGATCGTA 
GTAAACCTGT TGTTCACAGG TAACTGGCTA CGTGACGCCC TTGGAGCCAA CCTGAAAGAA
CACGGATTGT TGCCGCAGCA CTACAATGCC CTGCGCATCA TCAAGGGACG CCATCCGGAC
CCTGTGTCAG CCGGCGATAT CAAAGACGTC ATGCTTGATA AAGCAAGTGA CGTAACCCGT
TTGCTGGACA AACTCGAAAA ACTTGAGTAC GTACAGCGCC GCCTTTGCCC ACATAACAGA
CGAAAAATGG ACATCAATAT CACGCCACAG GGACTGAAAC TCCTATCCGA CGTAGATGTA
TTGATGGATA CTTTTTATGA TGATCTGGCA GACAGGATCA CAGCCGCTGA AGCTGCTGTA
CTCAGCGATC TGCTCGATAA AGTACGGGGA TAA
 
Protein sequence
MKIEQAINQR KFKDDYHKIV VNLLFTGNWL RDALGANLKE HGLLPQHYNA LRIIKGRHPD 
PVSAGDIKDV MLDKASDVTR LLDKLEKLEY VQRRLCPHNR RKMDINITPQ GLKLLSDVDV
LMDTFYDDLA DRITAAEAAV LSDLLDKVRG