Gene Cpin_3331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3331 
Symbol 
ID8359497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4094815 
End bp4095375 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content51% 
IMG OID644965504 
Productprotein of unknown function DUF395 YeeE/YedE 
Protein accessionYP_003122999 
Protein GI256422346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0286233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0021122 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATCT TAACTACGCC ATGGCCATGG TATGTTGCAG GTCCGCTGAT AGGGCTGACC 
GTCCCCCTCC TGCTATTGCT GGGCAACCGT CATTTCGGTA TTTCAGCCAA TCTACGGCAT
ATCTGTGCGG CCTGTCTGCC AAATAAAATC CCTTTCTTTT CCTATGACTG GAAAAAAGAA
TCATGGAATC TGTTCTTTGC GGCCGGTATT ATGATTGGTG GTTATATAGC TGTCACCTTT
CTGGCCAGTC CTACGCCATC TGTTATTGCG CTGCAACTGG AAACCGAATT ACAGGGCTAT
GGCCTTTCCT ACACTGGTTC CCTCCTGCCG GCAGACCTCT TTAACTGGCC GGCACTGCTG
ACGGCAAGGG GATGCATCCT GATGGTTGCC GGCGGCTTCC TGGTAGGTTT TGGTACCCGC
TATGCCGGCG GTTGTACCTC GGGTCACGCC ATCATGGGCC TCTCTAATCT GCAATGGCCT
TCACTAGTGG CTACCTGCTG CTTTATGGCA GGTGGTTTTA TCATGGCCAA TCTGATCCTT
CCTTTTATCC TTCAACTGTA A
 
Protein sequence
MNILTTPWPW YVAGPLIGLT VPLLLLLGNR HFGISANLRH ICAACLPNKI PFFSYDWKKE 
SWNLFFAAGI MIGGYIAVTF LASPTPSVIA LQLETELQGY GLSYTGSLLP ADLFNWPALL
TARGCILMVA GGFLVGFGTR YAGGCTSGHA IMGLSNLQWP SLVATCCFMA GGFIMANLIL
PFILQL