Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3331 |
Symbol | |
ID | 8359497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 4094815 |
End bp | 4095375 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644965504 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_003122999 |
Protein GI | 256422346 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0286233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0021122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATATCT TAACTACGCC ATGGCCATGG TATGTTGCAG GTCCGCTGAT AGGGCTGACC GTCCCCCTCC TGCTATTGCT GGGCAACCGT CATTTCGGTA TTTCAGCCAA TCTACGGCAT ATCTGTGCGG CCTGTCTGCC AAATAAAATC CCTTTCTTTT CCTATGACTG GAAAAAAGAA TCATGGAATC TGTTCTTTGC GGCCGGTATT ATGATTGGTG GTTATATAGC TGTCACCTTT CTGGCCAGTC CTACGCCATC TGTTATTGCG CTGCAACTGG AAACCGAATT ACAGGGCTAT GGCCTTTCCT ACACTGGTTC CCTCCTGCCG GCAGACCTCT TTAACTGGCC GGCACTGCTG ACGGCAAGGG GATGCATCCT GATGGTTGCC GGCGGCTTCC TGGTAGGTTT TGGTACCCGC TATGCCGGCG GTTGTACCTC GGGTCACGCC ATCATGGGCC TCTCTAATCT GCAATGGCCT TCACTAGTGG CTACCTGCTG CTTTATGGCA GGTGGTTTTA TCATGGCCAA TCTGATCCTT CCTTTTATCC TTCAACTGTA A
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Protein sequence | MNILTTPWPW YVAGPLIGLT VPLLLLLGNR HFGISANLRH ICAACLPNKI PFFSYDWKKE SWNLFFAAGI MIGGYIAVTF LASPTPSVIA LQLETELQGY GLSYTGSLLP ADLFNWPALL TARGCILMVA GGFLVGFGTR YAGGCTSGHA IMGLSNLQWP SLVATCCFMA GGFIMANLIL PFILQL
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