| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3327 |
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| Symbol | |
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| ID | 8359493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4090670 |
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| End bp | 4091050 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965500 |
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| Product | transcriptional regulator, HxlR family |
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| Protein accession | YP_003122995 |
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| Protein GI | 256422342 |
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| COG category | [K] Transcription |
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| COG ID | [COG1733] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000038683 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGTGAAAA ATAGTGATGG AAAAATATGG ATAGGGGATT GTCCGATACG GCAGGTGTTG
GATCGTTTTG GCGATAAGTG GTCGATTTTG GTAATAGAGT TATTGTCGCA TGAGGGGAAG
TTGCGGTTTA GTGAGATTGC GCAGACGATC GGGGATATTT CGCAGAAGAT GTTGACGGTG
ACGTTGCGGT CGTTGGAGTC TGATGGGTTG ATTATAAGGC AGTTTTTTCC GGAGATACCG
CCGCGGGTGG AGTATGAGTT GTCGGACTTG GGGAGGAGTT TAGTGCCGCA TATACAGCAG
CTGACGAGTT GGGGGCAGGA GCATATGGAG GCGATTAAGG AGAATAGGAG GCGGTTTGAG
GAGAAGCAGT CAAAAGGGTG A
|
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| Protein sequence | MVKNSDGKIW IGDCPIRQVL DRFGDKWSIL VIELLSHEGK LRFSEIAQTI GDISQKMLTV
TLRSLESDGL IIRQFFPEIP PRVEYELSDL GRSLVPHIQQ LTSWGQEHME AIKENRRRFE
EKQSKG
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