| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3315 |
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| Symbol | |
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| ID | 8359481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4079979 |
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| End bp | 4080755 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965488 |
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| Product | ABC transporter related |
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| Protein accession | YP_003122983 |
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| Protein GI | 256422330 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000690504 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATGATA CATTGGTACA AGAAAAGAAA ACTCCGGTGG CCACGGATGA TGAAGTGGTG
ATCCGTATCG AACATCTGAA AAAATCTTTT GGCGATAACG AGGTGTTGAA AGACATTAAC
CTGGAGCTGC ACAGGGGCGA GAATATTGTG GTACTTGGGC GCTCGGGTCA GGGTAAATCA
GTAACAATAC AATGTATTGC AGGTTTGCTG GAACCTGACG AAGGGGTGCT GGAAGTATTG
GGAAAAGAGG TAAAGGAACT TTCGCCGGAT GAACTGCGTG AGCTGCGTAT GAAGATCGGA
TTCCTTTTTC AGAGTGGCGC ATTGTATGAT TCTATGACAG TACGTGAGAA TCTGGCTTTC
CCGCTTACCC GCGTGTTAAA AATGAAAGAT GAAGCGGACA TTGAAAAGCG CGTGAAAGAG
GTGCTGGAAA GTGTCGGACT GGAAGAAGCG ATTGATAAAC TACCTTCTGA CTTGTCCGGA
GGGATGCGTA AAAGGGTCGG GTTGGCAAGA ACGCTCATAC TACGGCCGGA AATTATGCTG
TATGACGAGC CTACGACCGG ACTGGATCCT ATCACCTCCC GGGAGATCAG TGAGCTGATC
ATAAAACTCC AGGAGAAATA TGAAACCTCG TCTATTATTA TCACCCACGA TATGAATTGT
GCCCGTATTG TAGCAGACCG TATCGTCGTC ATGAATGACG GTGAATATAT CGCAACAGGC
ACATACGATG AATTGGCGAA GTCGCCGGAT GAACTCATTA ATAACTTTTT TAAATAG
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| Protein sequence | MDDTLVQEKK TPVATDDEVV IRIEHLKKSF GDNEVLKDIN LELHRGENIV VLGRSGQGKS
VTIQCIAGLL EPDEGVLEVL GKEVKELSPD ELRELRMKIG FLFQSGALYD SMTVRENLAF
PLTRVLKMKD EADIEKRVKE VLESVGLEEA IDKLPSDLSG GMRKRVGLAR TLILRPEIML
YDEPTTGLDP ITSREISELI IKLQEKYETS SIIITHDMNC ARIVADRIVV MNDGEYIATG
TYDELAKSPD ELINNFFK
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