| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3305 |
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| Symbol | |
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| ID | 8359471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4069140 |
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| End bp | 4069955 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965478 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122973 |
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| Protein GI | 256422320 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00000908006 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATACTTA TCGAGACCTA TATTCCGACA CAGCTGACCC ATCTGATCAA AACCTGCTGG
TACCTTGAGG TACCAGCTAA GCTGCCACAT CCTTACCAGG AAGACATATT GCCCGACGGG
CACCATGAAA TCATTTTTCA CCTGCCTCCG CATACAGGTA AACGTCGTTT TAAAGCAGGA
GAATGGCTCG AAGAGCCTGC TGCTTTTATC GCAGGACAGA CGCTGACCAG CTATACTTTA
GCCCTGATGC CCGGCGCACG CCTGTATGGT ATCCGCTTCT ATCCACATAC ATTGTCTGCC
TTTCTGAAAA TGCCTGTACC AGATACCGAA ACAGGTATCA CACCTTTGAG CGATATCGTG
CCGGAAGCAC CTTTTTGGGC GTGTATAGCA GCAGATCCGC AGCAGACTTT CAGACAGTTT
GAACGTTTGC TGACAAGCAG CATCAGCAAA CTGGAGCCGC CATCCGGCGC TTATGACTAT
GTACATGCAG CGGTCGCCGC TATTCTGCAA AACAAAGGGA ATATTTCGGT GGACAGGCTG
ATACAACGTA CCGGCGTTTC GGCCAAACAC CTGGATGTCC TGTTCAAACG ACAGGTAGGA
CTGACACCCA AGGCAATCAG CAATATTATC CGCTTTAATC ATTTTATTGC CTGGAAAAAC
CGGCATCCGG AGCAGAATTA TACCGCCAGT GGTTATGAGA CAGGCTTTTA TGACCAGTCT
CACCTCATTC GCAGCTTCCA TCAGTATACA CAACAATCGC CCAAAGCCTG GTTCAATAAC
AATACCGGCA TCAATGACGT ATTCGTGAAC ATCTGA
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| Protein sequence | MILIETYIPT QLTHLIKTCW YLEVPAKLPH PYQEDILPDG HHEIIFHLPP HTGKRRFKAG
EWLEEPAAFI AGQTLTSYTL ALMPGARLYG IRFYPHTLSA FLKMPVPDTE TGITPLSDIV
PEAPFWACIA ADPQQTFRQF ERLLTSSISK LEPPSGAYDY VHAAVAAILQ NKGNISVDRL
IQRTGVSAKH LDVLFKRQVG LTPKAISNII RFNHFIAWKN RHPEQNYTAS GYETGFYDQS
HLIRSFHQYT QQSPKAWFNN NTGINDVFVN I
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