Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3289 |
Symbol | |
ID | 8359455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 4051746 |
End bp | 4053197 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644965462 |
Product | hypothetical protein |
Protein accession | YP_003122957 |
Protein GI | 256422304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000775168 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000534443 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAGAT CATTCAGGAT CGCTGCTATT ATAACTTTAT TATCTGCAGG ATTATTCTCC TGCAAAAAAT ACCTGGACGT AAAACCGGAA GATCAGTTCG TGGAAAGTGC TGTTTACAGT ACAGAACAGG GCTTCATCAA CCATCTCAAC GGTCTCTACC AGGATTTGGG ATCAGCCAGC CTATACGGTG GTAATCTCAC GCTCACCTTT ATAAGCGTAC TGGGACAGGA ATATAATGTT TCCGGAACGA GCGGGCATGA CTGGTATCAG CACGCTAATT ATACATATAC CAATTCTCTG ACAGAACCAG CGATAGATGC TGTATGGACC AATGGATATA AGGTGATCAT GTCCAGTAAT AATCTGCTGG AGAACATGGA CAAATATCCG GGTGTACTGC GTCCTGGCAG GGATTCTATC ATCAGGGGAG AGGCTTATGC AATAAGAGCT CTTGTGCATT TTGACCTGCT ACGATTGTAT GGACCGGTAT ATCTGACGGA TTCCACCAGT AAGAGCGTGC CTTATGTCAC CCATGCTGAT ATTAATGTTC GTCCGCTATT GCCGGCTAAT AATCTGATCG ATAGCGTACT GGCTGACCTG GATCGGGCGG AAAGCTGTTT ACGTAATGAT CCTGTGATCA GTGCCGGTCC GCGCCGTATT CCCGGACAGC AGCAGGTGGA CTTCTTTTTA CAACAGCGTA ACGGCCGCCT GAACTACTTC GCCGTAAAAG CCCTGAAGGC AAGAATACAG CTCTATCGTG TGAATAAACC TGCGGCACTG GCGGAAGCAA AAGCAGTGAT AGAAGGCGCC GGGAAATGGT TCCCGTGGAC AAACCTGAAG CTGGTGACCG GTAATGGCGG TTTCCCTGAC AGAACCTTCT CGACGGAACA TCTCTTTGAT ATTTATTGTC CGAGACTGTA TGTGACTTAT ACGGGTAGTT TTTCGCCCAG TACGACAGAC GCAAAGATCC TGGCCGCTCA CCCTACAAGG CTGACGACGA CCTACGAATC ACTGGAAGGC GATTACCGCT ATAATCCAAG CTGGATCATT CCTACAGGTG GTAACAAGAC CTTCCGTTGC TTCTTCAAAT TTGCAGACCT GGATAATAAA GATAGCTCGG AACTGTTCCG CTACAGGATG CCTTTGCTGC GTATCAGTGA GATGTATTAC ATCGCGGCAG AAAGCGAAAC TGATCCTACG GCGGCGCTGG CTTATCTCAA TACGGTCAGG TATAACCGCG GACTGGCAGA TCTGCCATCA ACAGCAGCTA TAGAGACGGA ACTCAGGAAA GAATATCAGA AAGAGTTTTA TGGCGAAGGA CAGGTATTTT TCTATTACAA AAGAAAAGCA CAGGCAACTG TTCCCAGAGG TGGCGCTACC AGCGGCAACT TTACCATGTC GGCAAAAACA TATGTAGTGC CGCTGCCGAA AAGTGAATCT GATTATCGTT AA
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Protein sequence | MKRSFRIAAI ITLLSAGLFS CKKYLDVKPE DQFVESAVYS TEQGFINHLN GLYQDLGSAS LYGGNLTLTF ISVLGQEYNV SGTSGHDWYQ HANYTYTNSL TEPAIDAVWT NGYKVIMSSN NLLENMDKYP GVLRPGRDSI IRGEAYAIRA LVHFDLLRLY GPVYLTDSTS KSVPYVTHAD INVRPLLPAN NLIDSVLADL DRAESCLRND PVISAGPRRI PGQQQVDFFL QQRNGRLNYF AVKALKARIQ LYRVNKPAAL AEAKAVIEGA GKWFPWTNLK LVTGNGGFPD RTFSTEHLFD IYCPRLYVTY TGSFSPSTTD AKILAAHPTR LTTTYESLEG DYRYNPSWII PTGGNKTFRC FFKFADLDNK DSSELFRYRM PLLRISEMYY IAAESETDPT AALAYLNTVR YNRGLADLPS TAAIETELRK EYQKEFYGEG QVFFYYKRKA QATVPRGGAT SGNFTMSAKT YVVPLPKSES DYR
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