Gene Cpin_3289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3289 
Symbol 
ID8359455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4051746 
End bp4053197 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content47% 
IMG OID644965462 
Producthypothetical protein 
Protein accessionYP_003122957 
Protein GI256422304 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000775168 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000534443 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAGAT CATTCAGGAT CGCTGCTATT ATAACTTTAT TATCTGCAGG ATTATTCTCC 
TGCAAAAAAT ACCTGGACGT AAAACCGGAA GATCAGTTCG TGGAAAGTGC TGTTTACAGT
ACAGAACAGG GCTTCATCAA CCATCTCAAC GGTCTCTACC AGGATTTGGG ATCAGCCAGC
CTATACGGTG GTAATCTCAC GCTCACCTTT ATAAGCGTAC TGGGACAGGA ATATAATGTT
TCCGGAACGA GCGGGCATGA CTGGTATCAG CACGCTAATT ATACATATAC CAATTCTCTG
ACAGAACCAG CGATAGATGC TGTATGGACC AATGGATATA AGGTGATCAT GTCCAGTAAT
AATCTGCTGG AGAACATGGA CAAATATCCG GGTGTACTGC GTCCTGGCAG GGATTCTATC
ATCAGGGGAG AGGCTTATGC AATAAGAGCT CTTGTGCATT TTGACCTGCT ACGATTGTAT
GGACCGGTAT ATCTGACGGA TTCCACCAGT AAGAGCGTGC CTTATGTCAC CCATGCTGAT
ATTAATGTTC GTCCGCTATT GCCGGCTAAT AATCTGATCG ATAGCGTACT GGCTGACCTG
GATCGGGCGG AAAGCTGTTT ACGTAATGAT CCTGTGATCA GTGCCGGTCC GCGCCGTATT
CCCGGACAGC AGCAGGTGGA CTTCTTTTTA CAACAGCGTA ACGGCCGCCT GAACTACTTC
GCCGTAAAAG CCCTGAAGGC AAGAATACAG CTCTATCGTG TGAATAAACC TGCGGCACTG
GCGGAAGCAA AAGCAGTGAT AGAAGGCGCC GGGAAATGGT TCCCGTGGAC AAACCTGAAG
CTGGTGACCG GTAATGGCGG TTTCCCTGAC AGAACCTTCT CGACGGAACA TCTCTTTGAT
ATTTATTGTC CGAGACTGTA TGTGACTTAT ACGGGTAGTT TTTCGCCCAG TACGACAGAC
GCAAAGATCC TGGCCGCTCA CCCTACAAGG CTGACGACGA CCTACGAATC ACTGGAAGGC
GATTACCGCT ATAATCCAAG CTGGATCATT CCTACAGGTG GTAACAAGAC CTTCCGTTGC
TTCTTCAAAT TTGCAGACCT GGATAATAAA GATAGCTCGG AACTGTTCCG CTACAGGATG
CCTTTGCTGC GTATCAGTGA GATGTATTAC ATCGCGGCAG AAAGCGAAAC TGATCCTACG
GCGGCGCTGG CTTATCTCAA TACGGTCAGG TATAACCGCG GACTGGCAGA TCTGCCATCA
ACAGCAGCTA TAGAGACGGA ACTCAGGAAA GAATATCAGA AAGAGTTTTA TGGCGAAGGA
CAGGTATTTT TCTATTACAA AAGAAAAGCA CAGGCAACTG TTCCCAGAGG TGGCGCTACC
AGCGGCAACT TTACCATGTC GGCAAAAACA TATGTAGTGC CGCTGCCGAA AAGTGAATCT
GATTATCGTT AA
 
Protein sequence
MKRSFRIAAI ITLLSAGLFS CKKYLDVKPE DQFVESAVYS TEQGFINHLN GLYQDLGSAS 
LYGGNLTLTF ISVLGQEYNV SGTSGHDWYQ HANYTYTNSL TEPAIDAVWT NGYKVIMSSN
NLLENMDKYP GVLRPGRDSI IRGEAYAIRA LVHFDLLRLY GPVYLTDSTS KSVPYVTHAD
INVRPLLPAN NLIDSVLADL DRAESCLRND PVISAGPRRI PGQQQVDFFL QQRNGRLNYF
AVKALKARIQ LYRVNKPAAL AEAKAVIEGA GKWFPWTNLK LVTGNGGFPD RTFSTEHLFD
IYCPRLYVTY TGSFSPSTTD AKILAAHPTR LTTTYESLEG DYRYNPSWII PTGGNKTFRC
FFKFADLDNK DSSELFRYRM PLLRISEMYY IAAESETDPT AALAYLNTVR YNRGLADLPS
TAAIETELRK EYQKEFYGEG QVFFYYKRKA QATVPRGGAT SGNFTMSAKT YVVPLPKSES
DYR