| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3287 |
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| Symbol | |
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| ID | 8359453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4047078 |
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| End bp | 4048232 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965460 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003122955 |
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| Protein GI | 256422302 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.313343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00186616 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAACA GTAAAAAGAA TATCGACAAC GATAAACTGC TCCATTACCT GGAAAATGGT
CAAACGCAGG ACGATTCTGA TCTGAATGAA TCAGAACAGG CATTGCTGCG TCAATACCAG
GCCATAAAAG AGGAGATGGA TCTGAAGGAA TGGGCGAAGG CGGATGTGGA GGAAGGCTGG
GCAGCGCTTG GGCAGCGCCT GCAACAGCAG GATATTGACT GGAATGTACC AAAGAAAATC
AGGGTTCGTC CGATATGGGG GTATGCAGCT GCAGCTGCTG TATTGTTACT GGCAGGAGCG
TCCTGGTACT ATTTCTGGTC TGCTGGTCAG CATCCATCTC AACTAGCCGC CGGATCAACC
GAAAAATCAT CCCCTTCCGC TATTACCTTA CTTACTGCTG AAGGAGACGA AGTACAGCTC
GACACCTTGA AACGTTTAAA TGGCGCAACA GCTGTAAATG GTGAGGAACT GATATACGAA
AAGGGACAGG AAACGAACGA TCATATTTCC TATAATACCC TGATAGTGCC CAGAGGATAC
ACTTATCACC TGGTACTGTC AGACGGTACG AAGGTATGGC TGAACGCTGA CACCCGTCTC
CGCTATCCAT CAAGGTTCCC ACAGGATGCA CGCCTCGTGA GCGTAGAAGG AGAGGCTTAT
TTTGAAGTGA CGACAGATGC AGCACGGCCA TTTACTGTGC AGAGCAATCA TGCCTCCATC
AAAGTTTTAG GGACAGCTTT TAATATCAAT ACGTACGAAA ATAATATCGC AGCTACACTG
GTACAGGGAA AAATAGTAGT GCATCATAAG GGGGACAGTA CTTACCTCAG TCCGGGAGAG
CAACTGCTCA GCAAGGCGCC ATACGACAAC GCGAAGGTCC GTAATGTAGA TACGGATATA
TATACGGCCT GGAAAGATGG AGAACTGGTG TTTGTTGAAA CGACGCTGGA AGATATCTGC
CGCCGGCTTG AGAGGATATA TAATTACAGG ATCATACTAC CTGAGGGCGA AATAAGGAAC
CGTAAGATCG AAGCAAATCT GCCACAATAC AAAGAAATCA GCACCATAAC AGAATTACTT
GAGAAAATGA CAGACGTTCA TTTTAATGTC AACCAAAAAG AGAGAACAAT AACAGGTTAT
GCAGTAAACA AGTAG
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| Protein sequence | MDNSKKNIDN DKLLHYLENG QTQDDSDLNE SEQALLRQYQ AIKEEMDLKE WAKADVEEGW
AALGQRLQQQ DIDWNVPKKI RVRPIWGYAA AAAVLLLAGA SWYYFWSAGQ HPSQLAAGST
EKSSPSAITL LTAEGDEVQL DTLKRLNGAT AVNGEELIYE KGQETNDHIS YNTLIVPRGY
TYHLVLSDGT KVWLNADTRL RYPSRFPQDA RLVSVEGEAY FEVTTDAARP FTVQSNHASI
KVLGTAFNIN TYENNIAATL VQGKIVVHHK GDSTYLSPGE QLLSKAPYDN AKVRNVDTDI
YTAWKDGELV FVETTLEDIC RRLERIYNYR IILPEGEIRN RKIEANLPQY KEISTITELL
EKMTDVHFNV NQKERTITGY AVNK
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