Gene Cpin_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3277 
Symbol 
ID8359443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4036673 
End bp4037494 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID644965450 
Productputative esterase 
Protein accessionYP_003122945 
Protein GI256422292 
COG category[R] General function prediction only 
COG ID[COG2819] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.294344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0259177 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TACCTATCCT GCTGATACCA CTGTTGCTCC TGCTTGCTCA ATTGCAGGCA 
CAGAAAGCAG CACCACTATC CATAGGTGAA ACGCATACTT TTCGCTCGGA GATCCTACGT
GAAGACAGAA CGGTGAATAT TTATCTTCCG AAAGAATATA ATCCTGCGGC AGACAGGCAT
TACCCGGTGA TCTATCTGCT GGATGGTGCG ATGGATGAAG ATTTTGTACA TATCGCCGGA
CTTACACAAT TCCTCACCAT GATCGATACC CTGCCGCCAT CGATCCTTGT TGGTATTGCC
AATGTAGACA GGAAACGAGA TTTTACCTAT CCCAGCACCA TCAAAGAACT GACGCAAAAA
TATCCTACGA CCGGAGGCGC TGCCAACTTC ATCGCTTTCC TCTCACAGGA ACTACAGCCT
TTTGTAAAAA AGCATTATAA GGTCAATGAT TCCACTACCC TGATCGGACA ATCACTGGGC
GGACTCCTCG CTACCTCGAT CGTACTGAAG CAACCTGATA TGTTCATGAA TTATGTTATT
ATCAGTCCGA GTCTGTGGTG GGATGAAGGA TCACTATTGA CCATGGCCCC ATTCCTTATC
TCCACCAGAA AGGATATTCA TGCGCATGTA TTCATTGCTG TCGGAGATGA AGGTGAAGAG
ATGCAGGACG CGGCTACCAG ACTGGCCACC GTATTACAGG ATGCAAGACA AAAAGAGCTT
TACACCAATT TTCTATATCT CCCCAGAGAG ACGCACCGCA CGATCCTGCA CAACAGCGTA
TACAAGGCAT TGCAGGTCCT GCATGTAAAA CGAACCCGAT GA
 
Protein sequence
MKRIPILLIP LLLLLAQLQA QKAAPLSIGE THTFRSEILR EDRTVNIYLP KEYNPAADRH 
YPVIYLLDGA MDEDFVHIAG LTQFLTMIDT LPPSILVGIA NVDRKRDFTY PSTIKELTQK
YPTTGGAANF IAFLSQELQP FVKKHYKVND STTLIGQSLG GLLATSIVLK QPDMFMNYVI
ISPSLWWDEG SLLTMAPFLI STRKDIHAHV FIAVGDEGEE MQDAATRLAT VLQDARQKEL
YTNFLYLPRE THRTILHNSV YKALQVLHVK RTR