| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3271 |
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| Symbol | |
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| ID | 8359437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 4028304 |
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| End bp | 4030691 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965444 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003122939 |
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| Protein GI | 256422286 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.61861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0322761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGGA ACTATTTTAA AATTGCCTGG CGCAATCTCA AAAAAAGCAG GGGATATACG
TTTATTAATA TCGGCGGACT GGCAACAGGC ATGGCTGTCG CAATGCTGAT CGGACTCTGG
ATCTGGGATG AAGTCACCTA TGACAGGTAC AATCGTAATT ATGACCGTAT CGCCCAGGTA
ATGCAGCACC AGACTTTTAA CGGTCAGATA GACACCTGGC CGACGATGCC CTATTATATG
GGGGAAGTAT TGCGTGATCA GTATGGAGAT AACTTTAAAC AGGTCGTAAA GTCTTCCTGG
GATATGTATA AAGTATTGGC TGTAGGTGAT AAAAAGCTGC GTAAGATAGG CCGGTTTATG
GAAGCAGGTG GCCCGGAACT GATAGACGTC AGTATGTTGT CAGGTACCCG TGATGCATTG
AAAGATCCTG GTACAGTCCT TATTTCCGCT TCTGCTGCGA AAGCTTATTT CGGAGAGGTG
AATGCTGTCG GCAAAACCCT GTTGCTGGAC AATAAACAAT CCCTCATCGT GAGAGGTGTA
TACAAAGATC TGCCACACAA CTCTTCTTTC GGTAATCTCG ATTTCATTGC TTCCTGGGAT
GTTTTTATCG ATAGATATAT GGCCTGGATC AAAACAGTGT CTGATCCCTG GGGCAATAAC
GCATTCCTGC TATTTGTACG ACTGGCCGAC AATGCTGATC TCGCAAAGGT CTCCGCCCGT
ATCGCTGATA CAAAACTGAA TAATGTACGT CCGGAAGACA GACGTTATAA GCCGGTCATC
TTCTTACAGC CTATGAGTAA ATGGCACCTC TTCCAGTCGT TTAAAAATGG GATGAATACA
GGTGGACGTA TACAGTTTGT ATGGTTGTTT GGCGCCATTG GTGTAGTGGT TTTACTGCTG
GCTTGTATCA ACTTCATGAA CCTGAGTACC GCACGCTCGG AAAAACGTGC CCGCGAAGTA
GGTATCCGTA AAGCAGTGGG CTCTTTCAGA AAACAGCTGA TCTGGCAGTT TTTTAGTGAA
TCTTTGCTGG TGGTGATAAT CGGATTTGTA TTATCAGTGA TCCTGGTACA ACTGGCATTG
CCGTTTTTCA ATAATGTAGC TGATAAAAAG ATTACGATAC CATGGACAGG ACCGCTGTTC
TGGTTGGCAG GTATTGTATT CATCCTGCTG ACGAGCTTTA TTGCCGGTAG TTATCCCGCT
TTCTATCTAT CGTCTTTTCA ACCAGTCAGG GTACTTAAAG GTACTTTCCG CGCAGGGCGT
CATGCTGCTT TGCCAAGAAA GGTACTGGTC GTAATACAGT TCTCCGCTTC ACTGATACTG
ATCATCGGTA CTATCATCGT ATTCCGGCAG GTAGAGTTTG CAAGAAACAG ACCGGTAGGA
TATAGTAGGG AAGGATTGCT GTCAATGGAA ATGAGTATGA CGAATATTCA CGACCATTTT
GAGGTAGTAC GAACGGCGCT TAAAAATGCC GGTGCTATTG TGGATATGGC GGAAGCCAGT
ACACCTGTTA CTACGGTATG GCAAACAAAC GGCGATATCA GGTGGAAAGG GAAAGATCCT
TCGATGACGG TTGATATGCC TACACAAACC GTATCGCCTG AATACGGAAA GACGATCGGC
TGGCAGTTTG TGGCAGGACG TGATTTCTCT GATGCGTATG CGACCGATTC CGCCGCCTTT
GTCCTGAATG AATCTGCTGT AAGATTGATG GGCTTAAAGA ATCCTGTAGG TGAAACAGTC
TATTGGGATG GGACGCCGTT CATCGTCATT GGCGTGATTA AAGACCTGGT GGCAGAATCT
CCGTATGAAC CAGTACGTCC TTCGATGTAT GTCATGAACC GGGACTTTCT GGGTATCACC
AATATCAGGA TCAATCCGGC GGTAAGTAGT CATACTGCTT TAGCAAAAAT AGAAGAGGTG
TTCAGGAAGT ATAATCCGGA ACAACCGTTC GATTATCAGT TTGTCGATAT AGAATATGCC
CGAAAGTTCG GCAATGAAGT GAGGGTAGGT AAACTGACGA CCTTCTTTGC CATACTGGCT
ATTTTTATCA GTTGCCTGGG GCTGTTTGGT ATGGCCTCCT TTATGGCAGA ACAGCGTACG
AAAGAAATTG GCGTACGCAA AGTGCTGGGA GCATCGGTAT TCAATCTGTG GGCCATGCTC
TCTAAAGATT TCCTGCTGCT GGTAGGTGTT GCATTAGCTA TTGCCGTACC ACTGGCTTAC
TACTTTATGC ACGAGTGGTT ACAGCATTAT ACCTACAGAT CTGAAATCGC GTGGTGGATT
TTTGTTGTCG CAGGCGTAGG GATCATTCTG GTTACACTGG CGACGGTTAG TTTTCAGAGT
GTAAAAGCAG CCTTGGTAAA CCCGGTGAAG AGTCTGCGGT CAGAATAG
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| Protein sequence | MIRNYFKIAW RNLKKSRGYT FINIGGLATG MAVAMLIGLW IWDEVTYDRY NRNYDRIAQV
MQHQTFNGQI DTWPTMPYYM GEVLRDQYGD NFKQVVKSSW DMYKVLAVGD KKLRKIGRFM
EAGGPELIDV SMLSGTRDAL KDPGTVLISA SAAKAYFGEV NAVGKTLLLD NKQSLIVRGV
YKDLPHNSSF GNLDFIASWD VFIDRYMAWI KTVSDPWGNN AFLLFVRLAD NADLAKVSAR
IADTKLNNVR PEDRRYKPVI FLQPMSKWHL FQSFKNGMNT GGRIQFVWLF GAIGVVVLLL
ACINFMNLST ARSEKRAREV GIRKAVGSFR KQLIWQFFSE SLLVVIIGFV LSVILVQLAL
PFFNNVADKK ITIPWTGPLF WLAGIVFILL TSFIAGSYPA FYLSSFQPVR VLKGTFRAGR
HAALPRKVLV VIQFSASLIL IIGTIIVFRQ VEFARNRPVG YSREGLLSME MSMTNIHDHF
EVVRTALKNA GAIVDMAEAS TPVTTVWQTN GDIRWKGKDP SMTVDMPTQT VSPEYGKTIG
WQFVAGRDFS DAYATDSAAF VLNESAVRLM GLKNPVGETV YWDGTPFIVI GVIKDLVAES
PYEPVRPSMY VMNRDFLGIT NIRINPAVSS HTALAKIEEV FRKYNPEQPF DYQFVDIEYA
RKFGNEVRVG KLTTFFAILA IFISCLGLFG MASFMAEQRT KEIGVRKVLG ASVFNLWAML
SKDFLLLVGV ALAIAVPLAY YFMHEWLQHY TYRSEIAWWI FVVAGVGIIL VTLATVSFQS
VKAALVNPVK SLRSE
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