Gene Cpin_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3256 
Symbol 
ID8359422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp4008042 
End bp4009187 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content45% 
IMG OID644965429 
Productputative uncharacterized membrane-anchored protein 
Protein accessionYP_003122924 
Protein GI256422271 
COG category[S] Function unknown 
COG ID[COG4714] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAG GGACAATTGT AGTTTGTAAT AAGTTGTTAA CCAACTCTTA TCAGCAGAAA 
TATACCTATA TAACGAATAA TAACAACCAT CAGATGTTAA GATCCATTTA TGTTGCCGTA
TTACTACTGG CAACCATTGC CGTAAAAGCT GCCGGCCCTG TGGAAGATTC TACCGAAATT
TATCAGCGGC AGTATGAGCA GTTCGTAGAT TCTGTCAGAA AATCAGAAAA ATTTGAGACC
GGCCTAATCC ACCTGCCGGG TGGTAAAGCC AATATCGAAG TACCTGAAGG CTTTAAGTTC
CTGAACAAGG AACAGAGTCA GTACGTACTG ACTACGCTCT GGGGAAACCC GCCTGAAAAT
GCGAAAGATG TACTTGGAAT GATCTTCCCT GCAAAAGGAG ATCCTTTTAC AGAAGGGTCT
TATGCCTTTA TCGTTGAATT TGAGGAGATT GGTTATGTGA AAGACGATGA CGCAGAAAAG
ATCGATTACG ACGAGATGCT GAAGAATATG CAGACCGATG AAAAAGCCAC CAATGAAGAA
CGTGTAAAGA ATGGATACTC AACTGTGCAC ATTGTAGGAT GGGCGCAAAA GCCATTTTAC
GACGCTAAAA ACAAGGTGCT GCACTGGGCA AAGGAAGTGA AGTTTGGGGA CGAAGAAGGG
GCTAATACGC TCAATTATAA TGTGCGTATA CTGGGTCGTC ACGGCGTCCT GTCCCTGAAT
GCTATCTGTA CGATGGACGA ACTGCCGCTG GTGAAAGCCA ATATTAACCA GGTGCTGCAT
ATGGCCAAAT TCACAGATGG GAATACTTAC TTTGATTTCG ATCCGAAAAT GGACCAGGTA
GCCGCATGGA CGATAGGTGG ACTGGTAGCG GGAAAAATAC TGGCGAAAGT AGGCTTCTTC
GCCATTATCC TGAAGTTCCT GATCGCCGGC TGGAAATTTG TCGCAATAGG TTTTGCTGCA
TTGATCGCCT TCCTCAAAAA CCTGTTTACC CGCAGGAGAA AAGAGAAAAT GATCAACACG
GCAGGTCTTG CTGATCATGC AGATGATACT GCTGATGATG TAACAGCTCC TGCACCGGTA
GCCGATGTTG CCGTAGAACA GGCGCTTGCT GCGCCGGATA AAGATCCGAC TACGCCGACC
GTATAA
 
Protein sequence
MRKGTIVVCN KLLTNSYQQK YTYITNNNNH QMLRSIYVAV LLLATIAVKA AGPVEDSTEI 
YQRQYEQFVD SVRKSEKFET GLIHLPGGKA NIEVPEGFKF LNKEQSQYVL TTLWGNPPEN
AKDVLGMIFP AKGDPFTEGS YAFIVEFEEI GYVKDDDAEK IDYDEMLKNM QTDEKATNEE
RVKNGYSTVH IVGWAQKPFY DAKNKVLHWA KEVKFGDEEG ANTLNYNVRI LGRHGVLSLN
AICTMDELPL VKANINQVLH MAKFTDGNTY FDFDPKMDQV AAWTIGGLVA GKILAKVGFF
AIILKFLIAG WKFVAIGFAA LIAFLKNLFT RRRKEKMINT AGLADHADDT ADDVTAPAPV
ADVAVEQALA APDKDPTTPT V