| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3248 |
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| Symbol | |
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| ID | 8359413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3998505 |
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| End bp | 3999818 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644965420 |
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| Product | integrase family protein |
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| Protein accession | YP_003122916 |
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| Protein GI | 256422263 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGATG ATCAATCCTT CGGTGTTCAT TTTATGATCC GCAGGGATAA GGCACAGGAT
AATGTAGCTC CTATCTATGC AAAAATTTCG GTTGACGGTG ATTCTGCCTT GCTCTCCACA
AAGTATTGGG TACCCATTGC CGCCTGGGAA AACAAAAAGG GCCTGGCAAA ATCAGGCATC
CCAGAACTAA CGCAGTTGAA TACCGATCTT GAATTGGAAC GTTCGGCCAT TACCAACTGT
TATAAAACGC TTCGTGAAGC AGGCGAATTA TTATCACCTC ACCTGGTAAA GGCTACCTAT
CTTAAAGGTT CTAAACAAGC AAATGGATCG GTGGCTCCCC GTCTTACACT CCGCACATTA
ATGCAGAAGT ATGAAGAAGT GGAGGGCAAG CGACTTAAGA AGGGAACCTG GAAGAATTAT
ACTTCTACAT TCGCATATCT GGATGGGTTT CTTAAAAAGG AGATTCCAGG TGGAGATATA
CGAGTAGATA AACTAACAAA GGAGTTTCTT ACCTCCTTTA AAACGTACAT TCCAAAGAAT
CCCATAAAAG AAGGCTTCGT GTGTCAGGGA AACGGGTTGG CTAAACATAT TGAAAGAACG
ATGCGCATGG TCAATTGGGC GGTGGACGAA GAATTACTGG ACCGTCCTCC TGTAGGCTCG
TATAAGGTAA AGAAGAAAAA ACCTAAAAAG ATCTTTCTGG ATGAAGAGGA ACTGGCAAGA
ATGGAAGCGC AAGTCTTCCT GGATGAAGAA GTTGCTTATG TACATGACCT GGCTATCTTC
GCTTGTTACA CAGGTCTGGC CTATTGCGAT GTTATGAATG TTATCGATCA GGATATAAGC
ATATTGTTTG GCGCTACCTG GTTAAGTAAT GAGCGTATAA AGTCTGAGGG ATACTTCAAG
GTGCCTCTGT TGAAGAAACC ATTGAGCATT TTGAATAAGT ACCGTTATGC ACGTGATCGC
GGCAAACGGA AAGAAATTTT CCCATATATC TCCAATCAAC AGGTTAATAG GGCAATCAAA
GTCATTTTAC AAATTTCCCG CATTCATAAG AAAATCACTT TTCATAAGAT GCGCCATACG
TTTGGAACCA CGGTCACATT AGCGAATAAT ATGCCTATTG AATCGCTAAT GAAAATGATG
GGCCATTCTA AAATCAGTTC AACGCTGGAA TATGCCCAGG TTGTCGATAG TAAGCTTATG
AAGGATATGC AGGGGTTATC AGAACGGCTG GAAAAGCCGG TACATATTCG TAGACCGGTA
TTCGATGGAA GCATCAGAAA CCTGATGTAC CAGGCTTGTA GCTGCGTAAA TTAG
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| Protein sequence | MKDDQSFGVH FMIRRDKAQD NVAPIYAKIS VDGDSALLST KYWVPIAAWE NKKGLAKSGI
PELTQLNTDL ELERSAITNC YKTLREAGEL LSPHLVKATY LKGSKQANGS VAPRLTLRTL
MQKYEEVEGK RLKKGTWKNY TSTFAYLDGF LKKEIPGGDI RVDKLTKEFL TSFKTYIPKN
PIKEGFVCQG NGLAKHIERT MRMVNWAVDE ELLDRPPVGS YKVKKKKPKK IFLDEEELAR
MEAQVFLDEE VAYVHDLAIF ACYTGLAYCD VMNVIDQDIS ILFGATWLSN ERIKSEGYFK
VPLLKKPLSI LNKYRYARDR GKRKEIFPYI SNQQVNRAIK VILQISRIHK KITFHKMRHT
FGTTVTLANN MPIESLMKMM GHSKISSTLE YAQVVDSKLM KDMQGLSERL EKPVHIRRPV
FDGSIRNLMY QACSCVN
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