Gene Cpin_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3233 
Symbol 
ID8359398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3985837 
End bp3986571 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content50% 
IMG OID644965405 
Producthypothetical protein 
Protein accessionYP_003122901 
Protein GI256422248 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.252568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT CGACCACCAT GAACGAAATA ACAGCCTTAC TACACTCCGC ATACCAACCG 
GAGTATGCGC TGGTATTTTC CGCTAACAGC GAAACGGCTT ATGCAGAGGT GTACAGTTTT
GATGCGCGGG GAAAGATGAT CAATCCGCAC CCGTTAAGCT ATAAAGACGC CGACAGGCTG
AAAGCAGCGC TGTACGAGCT TTACCCGGAA AGCGACGAAC AAAAGCAGGC TTTTCTACGC
TGCAAGGGGC TGCTGCCGGA ACAGGTGCTG CATTTTGATG CCAGTGTAGA CGGGCATGTG
ATCTGGTACA CGCCTGCGAG AAAGGTTTCC CTCTGCTTTG GTGGCCAGCT GGAGCTGCCG
GATGGAGAGG CCTGTGTACC ACCGCTGGTG TGGAAAGCGA GCAAAAGCAA CCTGTATATA
TATGCCTTGC AGGATGATAA AAAGCCGGGA CTGCAAACAC CTTTGTGCCG CGCTCCTTTC
TTTAATACCG GCTACGATGG TAAAGTATGT ATGGGCAATG TGAAAACCAT TTTTCACGAT
ACCTATCTGG AAAATTTTAT GAAGCTATGG GAGGCCTACT TCTTTCACAG CGAATTTACC
CATTCGATAC AGCAGGAATC GCCCATCACG GGCAACCTGC TACAACTGTG GACGAAGCTG
GTGCAAACGG GCGAGGCTTT TCCTACAGAA CTGCTAAAAC CTACCGCTAT TACCTTACAA
AAACTGATGG CATGA
 
Protein sequence
MKQSTTMNEI TALLHSAYQP EYALVFSANS ETAYAEVYSF DARGKMINPH PLSYKDADRL 
KAALYELYPE SDEQKQAFLR CKGLLPEQVL HFDASVDGHV IWYTPARKVS LCFGGQLELP
DGEACVPPLV WKASKSNLYI YALQDDKKPG LQTPLCRAPF FNTGYDGKVC MGNVKTIFHD
TYLENFMKLW EAYFFHSEFT HSIQQESPIT GNLLQLWTKL VQTGEAFPTE LLKPTAITLQ
KLMA