Gene Cpin_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3223 
Symbol 
ID8359388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3977420 
End bp3978916 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content44% 
IMG OID644965395 
Producthypothetical protein 
Protein accessionYP_003122891 
Protein GI256422238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC GGGTACGTAC TTATTTAATT GAAGCCGCGC GAGAAAGTAA AAGGGTCGTT 
TATTACAGTG ATGTAGTAAA AGATTGCGAT TTGGACATTG ATATTTCCAG CGAGGCTGGT
AGAAAGAAGC TGAGTGAAGT GCTGGGCGAG GTTTCTGCCT ATGAGAACAG CCAGGTGCCG
GCCCGTCCCT TATTAAGTTC ATTAGCCATT TATAAAGATA AAGCCAGAAA TGATCATGGC
GACGGCTTTT ATAAAGTAGC TGAGAAACTG GGTAAGGGAT CATTTAAGCA GCTAAAGGAT
AGCCTGTACG GATTTTCGGA GGCAGAGGAA TGCAAGAGAT TCTGGCGGAA TGATGATAAC
TATAGGAAAT TCGCCTCCCT AACAACCGAT GCTGGTATTG CTGATGGGGG TTATTTCAAG
CAGGAGGAGC TTTTGTTCTT CAAACAATGG CAATATCGAT CGTACGATCC CAAGGATGCC
GAACATGTAG CAGCGAAAAC CTATTTAATG GACACGGTTT GGGATAAGAC CATCAAATTG
GGAAAGGAGG TAGTGAAAAG ACTAGAGGGC TTTCAGCTGG AGGGAGGAAA GTATTGGAGC
CAGCGGGGAT GGAAGGAACG TGAAGACGGC AGTAATGTAC AGGCGGCCAT TGTAAAGCCT
TATACCTGGG TAAAGATCTT TAAGGATGCA GATAAAGGGA AAGATATATT TTTTACTTTC
GGGCTCGATG CATCTGCCGC CAGGGAAGCA TTTATATACA AGATAGATTG CCAGGAAACA
AGAGATTCCA AACTGTTGCC CAGCCAGGTG GAACTTTGCA GGTCATTGAT TCCCGACGAG
GCCGAACGGA ATACTATTTC TTTTGAGGAG CTGGTAAATA CCAGCCTTGC CGACTTGATT
AGTATCTGTG TTGGATTTAT AGAAGCCTAC ACAAACCATT ACGACGAAAT TGTAATGGCA
GCTTGGGGAC ATACCGTTCA GCCAAGCCTG TTTAAAAATA GGTTGGTTAA AAAGGAAAAG
CCTACAGACG GTTATGATAC AATGCCTGCC AGCCAACCCA GCTTTACTGG AGTAGATATT
GACTATGTGG AGAAGGGAAA GGAGCAGAAA GACCTGGGTG ATAGAGGGGA GGGGTTGGTA
TTGCAGCGGG AAGTAGCCTT TCTTAAGCGG CACAACCTGC ACGACAAGGC AGCGCTGGTT
GGTATTGTAA AGGATGGTGA GGGCTATGAT GTATATTCAT TTGACGAGCA GGGAAATGAA
AAGTACATTG AAGTTAAAAC CACCACCGGC AATGAATATA CTCCCTTCTA TCTAACACAT
AATGAGTTAG CGTTCATGCG GCTGCATGCA AAGCAATATG CTATTTACCG GCTTTATCAA
TACAATGCCG ATAATAACTT TGCCGAGTTT TATGAGTTAA CGGGCGATAT TGAAAGCCAG
GTATTGATGG CACCTACCCA GTTTAAAGTT TTAATAAAAA AAGAAGTAGC GATTTAG
 
Protein sequence
MNARVRTYLI EAARESKRVV YYSDVVKDCD LDIDISSEAG RKKLSEVLGE VSAYENSQVP 
ARPLLSSLAI YKDKARNDHG DGFYKVAEKL GKGSFKQLKD SLYGFSEAEE CKRFWRNDDN
YRKFASLTTD AGIADGGYFK QEELLFFKQW QYRSYDPKDA EHVAAKTYLM DTVWDKTIKL
GKEVVKRLEG FQLEGGKYWS QRGWKEREDG SNVQAAIVKP YTWVKIFKDA DKGKDIFFTF
GLDASAAREA FIYKIDCQET RDSKLLPSQV ELCRSLIPDE AERNTISFEE LVNTSLADLI
SICVGFIEAY TNHYDEIVMA AWGHTVQPSL FKNRLVKKEK PTDGYDTMPA SQPSFTGVDI
DYVEKGKEQK DLGDRGEGLV LQREVAFLKR HNLHDKAALV GIVKDGEGYD VYSFDEQGNE
KYIEVKTTTG NEYTPFYLTH NELAFMRLHA KQYAIYRLYQ YNADNNFAEF YELTGDIESQ
VLMAPTQFKV LIKKEVAI