| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3221 |
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| Symbol | |
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| ID | 8359386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3975879 |
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| End bp | 3976442 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644965393 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122889 |
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| Protein GI | 256422236 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGGTG AATCCCCAAC CATTACAGTG ATCCATTTTA AGGGGCAAAT AGTACCTTTT
GAACAGCTAT ATAAAACCAA CTTCAAACGG TTGCTAACGA AAGCGCGCTC CTTGCTCGAT
GATGATGGAA AGGCCGAAGA TGCGGTCCAG GAGTTTTTTG TGCAGTTGTG GGAGCGTAAA
TCAATCGAAA TTACAGGATC TTCTGTTGAA GCATACCTTA TGATGGGCAT TCATTACAAA
TGCCTAAGCA TTCTTAATAA AGAACAGCGT GTTAATAAAT GGAAGCAGGG CTACGTCTAT
GCCCTGCTGG CACAGGATAT AAATGTACCC AACCTACTTC AGGAGTCGCC GCGTGAGGAG
CAGTTAAAAA TGCTCGAAAA GGCGATTGAT AAGCTAACGA ACAATCAACA GGAAGTGATG
CGTAAATGCT ACATGGAGAA CAGAAGCCAA AAAGAAGTGG CTGCCGAAAT GAATATTAAA
GTAAACACGC TGAAATCTCA TATCGAGCGA AGCCTGGTAA AATTTAAAAG CTTTTTTCAG
GAAAAATGTG GTACTTCTTT ATAG
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| Protein sequence | MSGESPTITV IHFKGQIVPF EQLYKTNFKR LLTKARSLLD DDGKAEDAVQ EFFVQLWERK
SIEITGSSVE AYLMMGIHYK CLSILNKEQR VNKWKQGYVY ALLAQDINVP NLLQESPREE
QLKMLEKAID KLTNNQQEVM RKCYMENRSQ KEVAAEMNIK VNTLKSHIER SLVKFKSFFQ
EKCGTSL
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