| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3211 |
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| Symbol | |
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| ID | 8359376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3962734 |
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| End bp | 3963333 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644965383 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122879 |
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| Protein GI | 256422226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.288008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAACGC CTTCTCTTCC CATTTTTATT AACCAGCAAC CTGATTTTGT GAAGAAGAAC
AATAACCTAT ACCAACCTGG TCTTGTACAA CGACTGAAGA AAGACGATGA GTCAGCTTTA
AGAGAACTTA TTACCCACCT CACTCCTACC CTGGTGTCGG ATGCGTTAGC AGTATTATCA
GACCGCCAGG AGGCGGAGGA TGTGGTACAA AACGTATTGA TCAACTTCTG GCGGGTAAAA
ATGAACCTCG CAAGTGATCT GGATTGCAGA GTGTATTTAC GCCGGGCCGT TCGGTACGTA
AGCGTAGCGG CGGTTAGAAG CAAAATGGCA AGGAGCAAAC GGCATCAGCA TTATTTTTAT
TCGAAAGACA AATTCTACGC CCGCCTGCCG TTGGAAAATA AAGAACTGTT GCAGCAAATT
GTACAAGCCA TTGGCAGGTT ACCACCCGCC GTGCGGCATA GCTTTAGCGA CATGTATTTA
CACGGTAAGA GCCATAAAGA AATCGCTACA GAACATAACA TCAGCCGGCA AACCGTGAAA
AACAACATCT CACAGGCGTT GAAATTCCTT AGAGTTCACC TGAAGCATTT ATTGCAGTAG
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| Protein sequence | MATPSLPIFI NQQPDFVKKN NNLYQPGLVQ RLKKDDESAL RELITHLTPT LVSDALAVLS
DRQEAEDVVQ NVLINFWRVK MNLASDLDCR VYLRRAVRYV SVAAVRSKMA RSKRHQHYFY
SKDKFYARLP LENKELLQQI VQAIGRLPPA VRHSFSDMYL HGKSHKEIAT EHNISRQTVK
NNISQALKFL RVHLKHLLQ
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