| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3207 |
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| Symbol | |
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| ID | 8359372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3959258 |
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| End bp | 3960646 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644965379 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003122875 |
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| Protein GI | 256422222 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.176888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.977355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAATGA CACCTAAACA AACTATACTC TCTTTACTCC TTTGCCTGCT GGTGCAAGCC
TGCTCTCTTA TTAAAGCCGA CGTACCGCTC GATAAAGTGG CAGGGCGGCA GATATTTCAA
AACCCCGACT CCGCCATCGC AGCCGTAACC GGTATATACG AAGGCATATC ATCCACCAGT
AACTTCTTCA GCGCCGGGGC ATCTGTTTAT GGAGGACTGT ACGCAGACGA ACTCGTATAC
ACGGGCCTGA CCGTACCGAT CACTGAATTC TCCAACAGCA CGCTCAATTC CGGCAATACC
ACGCTCGAAA CTATATTCTG GAGAAACACC TACTACTTCA TCTACCGCAC CAACGCCTGC
ATAGAAGGGT TAGCTGCCAG TGAAAGTTTG GATGCCGGCC TGAGAAACCA GCTTACCGGG
GAGGCAAAGT TTTTCCGGGC CTTTCTTTAT TTCTACCTGA TGCAGTTCTT TGGAGAAGTA
CCCTTAGTTA CCAGCACCGA TCAGTTGATT ATTGAAACCA TGCCCCGGAT ACCCCTGGCT
GTTATAAAAG AATCGATCTT TACCGACCTG CGGGATGCCA AGGCACTACT TAAAGAAAAC
TATCCTACCA GCGACCGGGC CAGGGCCAAT AAATGGAGTG CCGCTGCGCT GCTGGCACGA
ATGTATCTCT ACGAACAAAA CTGGCCAATG GCCCTGCAGG AAGCTACCCA GATCATTAGC
TCCGGCACCT ACCGGCTGGT AGGGCCGGAT AGTGTGTTCC TGCTAACCAG TAAAGAAGCT
ATACTGCAAA TACAGCCTGT GATTCAGCGT TATAACACGA TGGATGGTTT TCTGTTTATA
CCCAGCGCCG GTATTCGTCC TTCTTTTGCG ATTACTACCT CGCTTATGAG CGCCTTTGAA
CCAGGCGATC TGCGGCAAAC GAACTGGGTG GCATCGCAAA ACAATAACGG TATCACTTAT
AACTACCCGT TCAAATACAG AAAACGGCTG GATGCATCTG CGGATTTCAA GGTTACTGAA
TATACCAACC TGCTACGGCT TGCCGAGATC TACCTCATAA GGGCAGAGTG TAATACAGTA
CAGGGATTAC TGCCCGCGGC TATTAGAGAC ATAGATATCA TAAGACGTCG GGCCGGTCTG
CCGCTTATTG GCGAAACACA GCCAAATATG AACGCGACGG ACCTGATGGC GCTGATACGC
CATGAAAGAA GGATAGAATT CTTCGCCGAA TCGGGACACA GATGGATGGA TTTAAAACGC
GCCGGTAATG CGGATGGGCT GATGCAAAGC TTAAAGCCCG GCTGGAAAAG CACAGGGCTT
CTGTGGCCCA TACCTGCTAA CCAGATCGTT CTAAATCCAT CGCTTGTTCA AAACCCCGGT
TATCGTTAA
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| Protein sequence | MLMTPKQTIL SLLLCLLVQA CSLIKADVPL DKVAGRQIFQ NPDSAIAAVT GIYEGISSTS
NFFSAGASVY GGLYADELVY TGLTVPITEF SNSTLNSGNT TLETIFWRNT YYFIYRTNAC
IEGLAASESL DAGLRNQLTG EAKFFRAFLY FYLMQFFGEV PLVTSTDQLI IETMPRIPLA
VIKESIFTDL RDAKALLKEN YPTSDRARAN KWSAAALLAR MYLYEQNWPM ALQEATQIIS
SGTYRLVGPD SVFLLTSKEA ILQIQPVIQR YNTMDGFLFI PSAGIRPSFA ITTSLMSAFE
PGDLRQTNWV ASQNNNGITY NYPFKYRKRL DASADFKVTE YTNLLRLAEI YLIRAECNTV
QGLLPAAIRD IDIIRRRAGL PLIGETQPNM NATDLMALIR HERRIEFFAE SGHRWMDLKR
AGNADGLMQS LKPGWKSTGL LWPIPANQIV LNPSLVQNPG YR
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