| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3197 |
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| Symbol | |
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| ID | 8359362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3946925 |
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| End bp | 3947476 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644965369 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003122865 |
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| Protein GI | 256422212 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.461127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAG AAAGCACATT CTGCAATGAA TTTGTACTGC GAGGCCTTAT CGAAGGAGAT
GAGCAGGCAT TGACAAAAGT TATAGGTCGC TATCGCGACT TTCTTTTTAT GCAGGCCCAG
AGAATGCTGG GTGATGTGAT GGAAGCAGAT GATGTGGTGC AGGAGGTGTT CATCAAACTC
TGGAATGTTA AAAGCAAATT AAAACCGGAC ACATCATTAG ATGTATATTT AAGCGTACTC
ACCAAAAACG CCTCAACCTC TGTTTTGCGG AAAAGAAAGG TGTGGAAAAG AAGGCATGCA
GGATTCACAG CGGGCCAGTC ACACTATTTT CAGATGAAGC CAATGGAAGA CGAGGAATTG
GGGCAACAGC TTCGAACGGC TTTTCAACAG CTTAGTGAAG CGCAGCAGCG TATCTTCAAC
TACGTTTATA TAGAAGACAA GAGCTATGCT GAAATTATGC AGGAGCATAA TCTTCGACTG
CAAACAGTGA AAAATACGGT ATCTAATGCC CTCAAGAAAC TTCGCAACAA CTTGCAGGTA
TTAATAAAAT AA
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| Protein sequence | MKEESTFCNE FVLRGLIEGD EQALTKVIGR YRDFLFMQAQ RMLGDVMEAD DVVQEVFIKL
WNVKSKLKPD TSLDVYLSVL TKNASTSVLR KRKVWKRRHA GFTAGQSHYF QMKPMEDEEL
GQQLRTAFQQ LSEAQQRIFN YVYIEDKSYA EIMQEHNLRL QTVKNTVSNA LKKLRNNLQV
LIK
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