| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3185 |
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| Symbol | |
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| ID | 8359350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3917634 |
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| End bp | 3924890 |
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| Gene Length | 7257 bp |
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| Protein Length | 2418 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644965357 |
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| Product | hypothetical protein |
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| Protein accession | YP_003122853 |
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| Protein GI | 256422200 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0865533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTT TGAGACTTTT TCTTCTTGGT TTATTGGTGC TGGTGCCGCA CCTGGCGGCA
TGGGCCCAGT CGTATAGCAT TCAGGGGCCG TCTTGTGTTT TACCGGGACA GGCAGTGACG
TTTAGCATTA ATGGCTCCTG GAGCATTGGA GATAGTTTTT CGTGGTGTGT GAACGGCGGT
ACGATCTCGG GTGTTAGCAC AAGTTGTAAG AATGGCCAGA ACGTGTCGAA TATTACCGTG
ATCTATTCGA ACAATGCCGG CTCTACACAA ATAAGTATGA GTAAAAATGG CGGTACTACG
GTGTATTTTT CGCCGGTGGT GCTGAGCGAT AATCAGATCA ATGTAGGCGC TACGCAGAAT
ATAGTGAGTG GTACGGTGCC AGATCCGCTT ACCTCTGTTA CCGCCATTCC TGGCTGTGAG
GGGTATACGT TTCAGTGGCA GCAGAATCCG TATACGTTTA ATGCCTTGTC AGACGACTGG
ACAGACATCG ATGGTGCTAC GAGCGCCACG CTTACGTTAC CGGCAATGAC ACAAACGATG
AACTATAGAC GTGTGGTGTT TGCAGGTGGC TTTTCGGTAA CGTCTACCGG CATCACGGTG
AACGTGGTTC CGTCGCTAAC GGGTGGTACC ATAACCAACC CGGTAAGCCA GCCGGTGATC
TATAATACCA ATCCGGGTAC CATTAACTCT GCCACGGATG CTTCCGGCGG CTGGAACGGC
AGTTATGCGT ATCAGTGGCA AAAAAGCACA GATGGTACGA ATTATTCGGA TATCTCCGGA
CAAACGGGCC TTTCCCTGAA CCCCGGAGCG CTTACAGCGT CTACCTATTT TAAAAGGATG
GTTAAGAGAG GCACGGAAAC AGCGTTTTCG AATGTGGTGT TGATCAGCGT GTATCCGCAG
TTTGTGATTG GCAGTATTGC CAGCCCGGTA GGCAGCGCGG TGAATTATAA TACGTCTGTC
CCGCAGATCA ATGGCCCTAC CCGCAGCGGT GGTGGCTGTT CGGGAAGTTA TTCTTTCAAA
TGGCAGTCTT CCACGAATGG TACTACGTTT AGTGATATTG CGGGGGCAAC GGCGTTGAAC
TTTACACCCG GACCGCTTAC GGCTTCTACC TATTACCGGG TGGTGGTGTT CTGTGGATCG
GAAAGCAGAA CATCGAACAG CATTTATATT CAGGTATATC CTCAGTTAGT GGCTGGCACG
CTTTCACCCG CCAGCCAGAG TATTGATTAT AATACAGTGC CCACTGCTAT TACCGGCACG
GCAGCTACAG GCGGCAACGG CACGTACAGT TATGCCTGGC AGTCTTCGCC GGATAATATA
ACCTTTTCAA CCATCAGCGG AGCTACGGGC GTAAATTATA CGCCTCCTGC GCTTACGGCT
ACCACACATT ATCGCAGGTC TGTTACCTGC AATGGAGTAA CGGTGTATGC GCCTAAAGTG
ACGGTAACAG TAGATCCTCC CCTCACCTCG GGCGGTACGA TTACACCGGC TACTGTTACG
GTAAATTACA ATACCAGTCC CGGACAGCTT TCGGGTACGG TGCCTTCTGG CGGTGGACCA
TTGTATGACT ATAAGTGGCA GTTTTCAACG GATAATGTTA GCTGGAGCTA CATCAGCGGG
GCTACGGCCC AAAATTATAC GCCACCTGCG TTAACCAGTA AGCGGTATTA CCGCAGAGAG
GCGATCAGCA ATGGAACCTC TATATGGAGC AATACGGCGA CGGTGTTTGT GTATGCGGCG
TTACAAGCCG GTAGTATATC TCCTGCCAGC GCAACGATAA ATAACAACGC GGTGGCACCA
CAGCTAACGG CGAATCCTAC GGGCGGTAGT GGTGTGTATA CCTATCAATG GCAGTCGTCG
GATAACAACA GCACCTGGAC AAGCATTTCC GGGGCTACAG ACGATCAGTT GAATCCGGGA
ATGCTTACCG AAACGGCTTA TTACAGGGTG ATTGTTACCA GCAACGGAGT TTCGGCTACT
GCTGCAAGTG TAGCGGTGAA TGTATTGCCG GAGTTCTCCG CAGGCGCCAT TAGCCCCGCC
CTGAAGAGCA TTAACTACAA TACAGCCGCC GGCTCGTTTA CGGTGAGCCC TTCGGGCGGT
AACGGCACGT ATAGTTATGT TTGGCAATAT ACGGAGGACG ATGGTTATTG GTACACCATC
AGTGGGGCTA CGTCAGCAAC ATACACCGCG GGTACTTTAA CGAAGGACAG GTCTTTCCGG
GTGATCGTTA CGAGCAATGG CGTTTCACAA ACAAGCATAA GTGCTACCGT AAAGGTGTAT
CCCCAACTGG TGATCGGAAC GGTGAGTCCG GCTGTTCAAA CGGTTTCGGT GAACGGCGAG
GCGCAAAGCT TGCGGTTGTC TACCGTGTCA GGTGGAAATG GCGTGAACAG CTTTACCTGG
CAGCAATCGG CGAACGGCTC TTCATGGGCA GACATAGCCA ATACGGATAA CCAGAATTAT
CAGCCTGCTG CGGGAACAAC GAATCAGTAT TACAGGGTGA AGGTAACGAG CAACGGAGTA
TCAGTGTTCT CCAATCCAGC CCTGGTGCAG GTGCAATTGC TCGGTGGCAT TATTGGCGTA
TCGGCATCGC CCGTGGCGCC AGGTGGCAGC GCCAGCATTA CGAATGTGGC GGGTGCTTCT
AATGGAGCTT GCGCCGGTGG GTATGCCTAT GAATTTCAGA AGTCGACCGA TGAAATGAAT
TGGGATGTGC TGCCTTCGGC CAGCCTTACG GGCCTTACCG GCACGGCTTT TTATAGAAGA
AAGGTTACCT GTGGAGCGGA AGTTACTTAT TCCAATACAG TATGCATTCG CGTGGAAGGT
GCGCAAACTA TTATTCCGGA TACGTCTACG ATGGTATCGG TTACGGAGCC AGTAGCAACA
ATGAAGGCAT ACGGATCGGG CGCTTCGGCC ACGAACATGA ATTATATCCG TACCAGAACG
GTGCGTAAGT CTGGCGTTAC TACAGAAACG GCGGCCGATG CGCTAACGAA TGTACAGGAT
GTACGCGAGA GCACAGAGTA TATGGATGGT TTCGGACGTA CGCTGCAGGT GGTGGATAAG
AAGGCGACGA ATGCAGGCAA GGATTGGGTG AAAACGACCT TCTATGATGA CTTGGGCCGG
GAAGCGGTGA GCTTTTTACC CTATCCGGAT AATGCTTCGG ATGGCAATTT TAAACTAAGC
CCTGGCAGTG TGCAGACAGC CTTTTATAAT ACCTTCTATG AGAATAAGGA AAACTTTTAC
TATTCGAGGA AGGTGTTCGA CAATGCCCCG GATGATGAGG TAAATGAAAC GCGTAAGCCG
GGTAAGTCCT GGGAAGGAAA TGCCCGTGGC AACAGAACGC TTTCACGCAC GAACAGATTG
AGCGAGGGCG TGCGGGTTTG GAGAATCGGC TATAGCGAGT CGGACCTGCC GGTAAGTACC
GCGGTGTATC CGGCCGGTAG TTTGATGGTA ACGGAAACGA CGGATGAGTC GAATACCAAA
ACGGTAACGT ATAAGGATGA ACAGGGTCAG GTAGTGCTGG AGAAGGTGCA GTTTGGAGCT
AAGATCGGCG AAACACATGA TGACTGGCTG TGTACCTATT ATGTACGGGA CGATTTTGGT
CGCCAGCGCG TGGTGATTAC ACCGAAGGCG GTAAATGCGA TTAAGAGCAA TTGGGTGATG
ACCTCTGCGA TTTTTACGGA GCTGTGTTTT GGTAGTTTTT ATGATAAATA TGGCCTGGCG
GTGGTGAACC GCATGCCCGG TGCCGTGAAT GAAATGGTGT ACGATGGCCG GGAGCGACTG
GTATTGGAGC GGAACGGAAA TGATAAGCAG CGCGGCTATT GGCGGCTGGT AGGCTTTGAT
GCCCTGAACC GGGTGGTAAT GAACGGCCAG TACTTCTCTC CTTCTTCCAG ACTGGTACTG
CAGGATAGTC TGTTAACCTA CGGCGTAGCG TCGAAAACGG TTACTCACAG CTATCCGGAA
GTCAACCTGG TGATGGAACA GTATGGCGGG GCTGCTTTGT ATGAGGCAAC TACCAGCATT
ACTTTGCTGC CGGGCTTTAA TACGAATACG TCGGCCGTTA CGCTGGAAAT AGACCCGGCG
GCGGCGGGTG ATACAGAGGT GGTAACGCTG AATAGTTTCC TTACAGCCGT GAATCCCGCT
TCTCTCAAGG TAAATAAGTA TTTTTATTAC GATGATTATA CGTTCGCCGG TGCTTTGCCT
GCTGTTCCGT CGTTGTTGGG TAAGGCGAAG GTGTATAGCA ATGATAACCC GGATGTTCCT
GCTGCTTTTA GCACCATAAA CACCGGTTTG TCTACGGGCG TTAAAGTAAG GATTTTGGGC
ACCGATCAGT GGCTGGTAAG TACCGCGTAT TTTGACCATA GGAACAGGAA TGCCCAAATA
GTAAGAAATA ACAGCAGTGG TGGCATTTCC ACTACAACTT CGCTGTATAA CTTTTCTGGG
GAGCTGCTCA GCAGGTATGT TGCACACATG AACGCAGCGG CAGCCACTAC TCCTACTACC
TTATTGTACA CGTATCATTT CAACCCGGCA GGAAAGATAG ATTCTGTTAA GCTTTGCCTG
AATGATGACT TTGCCGCACA GCGCACCATT TCGTATAAAA CGTATAATGA GCTGGGCAAG
GTGAGTAAAA AACGGATCGG CGTAACCGGA ACAACCGCCC AACTGGAAAC GTTTGATTAT
AGTTATGGCA TGAACGGATT GGAGGGTATT AATAAGAGTT TTGTTAATGG TACGGGCGGT
TCGTCGAATT GGTTCGGACA GGTGATTGGT TTTGATAAAG GGTTCAGTGC CCGCCAGTAC
AGCGGTGAGC TGAGTGGTAG TAGCTGGAAA ACGAAAGGAT CGGTAGCCCG CGCACTCGGT
TTTGGGTATG ATCAAATGAG CCGCCTGGTG GAGTCTGACT TTAGTCAGCA GAATGAAGGC
AGCACCACCT GGACCAACAG CCCTGTCGAT TTTTCGTCTG CCTTTAAGTA TGATGACAAT
ACCAATCTTT CTTCTATGGT GCAGTATGGT ATGGATGGCG CGGTGAGCAG AAAGGTGGAT
AGCCTGGAAA TGGGCTTTTA TGCGAATTCG AATAAGCTGA ATTATGTGAA AGATCATAAG
AATGTAAGCG GTGGCCAGAA CCGGGATGAT TTTAATGAGC TGGTAAGTAA TACGGCTACC
GACTTTACGT ATGACCAAAA CAGTAACCAG ACCAGAGATC GTAACAAAGG GATCGATTCT
ACCTGGTACA ATGTGCTGAA CCTGCCGGAA AGAGTGGCCG TGCCTGGAAA GGGTGTTGTT
TCGTTCTTGT ATGATGCAGA TGGTAACAAG CTGAGAAAGC TGGTAGTAGA TAGCACCAGC
ACACCGGTAA AAAGGATAGA AACGGATTAT ATGGGAGATC TGGTATATAC CAATGACACG
CTGAGAGAGG TATTTTATGA TGAAGGCAGG ATAAGAATGG TGTACAAGGA GAACAGACCT
CCTAAGTTTA GCTGGGATTA TTATATACCG GATAACGCAG GTAATATAAG AATGGTGATT
GCCACCGAAA GCGATACGTC TAAGTACGTA GCCACGATGG AACCGGAGTA TGCGGAAACG
GAGAATTTAC TTTTCAGTAA TATCGACAAT ACCCGTGTTC CCAAACCGGT AGGCTATCCT
GCGGACGCAT CGAATGCCCC TAACAACTTC GTGGCCAAAC TGAATGCACA GAATGGACAG
AAGATCGGCC CTTCCCTGGT ATTGCGTGTA ATGGCCGGTG ATACGGTACA GGTGGGCGTA
AAGGCCTTTT ATAAATCGGG CAGCAGCAGT TCCTACACCT CCCCTGTTAA CGACCTGGTA
ACCGCGTTGC TTTCTGCCTT TAGCGGCGTG GGCGTGGTCG ACGGTATCCA TAAAGGATCA
GGCGCGGGAA GCCCGATCAG TACCATGAAT GCCGCCTTGT ATAACGAAAT GAAGAATAAC
GACCCATCCC AGAACCAGCC GGATAAGCTG AAGGCATTCA TGAACTACGC CGGATTTGAC
GATCAGTTCA ATATGTCGGA TGATAACACA GGGGTGTTAC AGGTACAGAA TGCGCCCGAT
GCGGTGCAGG TATTGAGTAC GGGCAAAATG GTGGTGAAGA AAACGGGCTT TATGTATTTC
TTCGTATCCA ACGAAACCGG ACAGGATGTG TACTTCGACC GGCTGGTAGT GGAGCACTAT
GGCCGCCTGT TGGAAGAAAC GCATTATTAT CCGTATGGCG GTATCATGGC AGGCATTAGC
AGCAAAGCAT TGAAAGGCGA TGACTATATC GAGAACCGCA AGCTGTTTGG CGGAAAAGAA
CTGAACGACA AGGAATTTGC CGATGGCGCT GGTCTGAAAT TGGCTGATTT CGGTGCCCGC
TGGTACAACG CCCTTGCAGG CAACTGGACC ACCCTCGACC CTAAAGCCTC GGAAATGCAG
GCATTCAGTC CTTACAATTA TTGCTTAGGC AACCCGGTTC GCTATATAGA TGGAAATGGC
AAAAAACCTA CCGATATTGT GTATATAGAT ATATACGGAC GGGAAGTGCA CAGAATCAAG
AGCGATGCGG AGTTCAGAAC ATTCATTCAA TTCTCCTATA TGGCAGCAGA TCCTGCAAAG
TCGAACATAG GCTGGATAGA AGTACCGATG CCTGGCATTA TCGCGGAAAA AGGGGGAATG
GCTACTACAG ACGATAAATA TCAGCAATAC GACTACCTGA TCGCCGCACG TACCGGCTAT
GTGAACCAGG CAAAGAATGC AGGCGCTTTG CAACTGTATA CAGAAGGAGG AAATCCAATA
CCCAAGTCGG AGCTGGCTCA GATTCCTGAT CTTAATCCTA CCTTGGTGAA AGCAATGGTA
ATGGAAGAAT CTACCATGGG CGATCGCGGC ATAACGGATA TTATGCAATC AAACGTCCGC
GGCGACTGGA AAACTTCCCA TCAGTTAAAA CAAGCCTATG GAATAAAAAA GGACGAAGTA
ATGACCCCTT CCATATCACT CTGGTTAGGC GTTAGAATAC TTATGACCAA AGGATTCAAA
GGCGGAATAA AAGTAGACAA AGGCGGGAAA AAGACCTACA CCTTCCAGGG CTACAAAAAA
GCCGTTAAAA ATTACAACGG TGGCGGCAAC GAGTTCTACA CGGAGCAGAT AGAGCAGTTG
CTGAAGAAGG TGATAGAGGG TAATAAATCA ATACCAAAAA AAGCCATAGA GTGGCTTAGC
AGGCCTCCAC AGTTAAAAAT TCCAGAGCAG CAAAAAAACG AACCAATACT TAGATAA
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| Protein sequence | MRFLRLFLLG LLVLVPHLAA WAQSYSIQGP SCVLPGQAVT FSINGSWSIG DSFSWCVNGG
TISGVSTSCK NGQNVSNITV IYSNNAGSTQ ISMSKNGGTT VYFSPVVLSD NQINVGATQN
IVSGTVPDPL TSVTAIPGCE GYTFQWQQNP YTFNALSDDW TDIDGATSAT LTLPAMTQTM
NYRRVVFAGG FSVTSTGITV NVVPSLTGGT ITNPVSQPVI YNTNPGTINS ATDASGGWNG
SYAYQWQKST DGTNYSDISG QTGLSLNPGA LTASTYFKRM VKRGTETAFS NVVLISVYPQ
FVIGSIASPV GSAVNYNTSV PQINGPTRSG GGCSGSYSFK WQSSTNGTTF SDIAGATALN
FTPGPLTAST YYRVVVFCGS ESRTSNSIYI QVYPQLVAGT LSPASQSIDY NTVPTAITGT
AATGGNGTYS YAWQSSPDNI TFSTISGATG VNYTPPALTA TTHYRRSVTC NGVTVYAPKV
TVTVDPPLTS GGTITPATVT VNYNTSPGQL SGTVPSGGGP LYDYKWQFST DNVSWSYISG
ATAQNYTPPA LTSKRYYRRE AISNGTSIWS NTATVFVYAA LQAGSISPAS ATINNNAVAP
QLTANPTGGS GVYTYQWQSS DNNSTWTSIS GATDDQLNPG MLTETAYYRV IVTSNGVSAT
AASVAVNVLP EFSAGAISPA LKSINYNTAA GSFTVSPSGG NGTYSYVWQY TEDDGYWYTI
SGATSATYTA GTLTKDRSFR VIVTSNGVSQ TSISATVKVY PQLVIGTVSP AVQTVSVNGE
AQSLRLSTVS GGNGVNSFTW QQSANGSSWA DIANTDNQNY QPAAGTTNQY YRVKVTSNGV
SVFSNPALVQ VQLLGGIIGV SASPVAPGGS ASITNVAGAS NGACAGGYAY EFQKSTDEMN
WDVLPSASLT GLTGTAFYRR KVTCGAEVTY SNTVCIRVEG AQTIIPDTST MVSVTEPVAT
MKAYGSGASA TNMNYIRTRT VRKSGVTTET AADALTNVQD VRESTEYMDG FGRTLQVVDK
KATNAGKDWV KTTFYDDLGR EAVSFLPYPD NASDGNFKLS PGSVQTAFYN TFYENKENFY
YSRKVFDNAP DDEVNETRKP GKSWEGNARG NRTLSRTNRL SEGVRVWRIG YSESDLPVST
AVYPAGSLMV TETTDESNTK TVTYKDEQGQ VVLEKVQFGA KIGETHDDWL CTYYVRDDFG
RQRVVITPKA VNAIKSNWVM TSAIFTELCF GSFYDKYGLA VVNRMPGAVN EMVYDGRERL
VLERNGNDKQ RGYWRLVGFD ALNRVVMNGQ YFSPSSRLVL QDSLLTYGVA SKTVTHSYPE
VNLVMEQYGG AALYEATTSI TLLPGFNTNT SAVTLEIDPA AAGDTEVVTL NSFLTAVNPA
SLKVNKYFYY DDYTFAGALP AVPSLLGKAK VYSNDNPDVP AAFSTINTGL STGVKVRILG
TDQWLVSTAY FDHRNRNAQI VRNNSSGGIS TTTSLYNFSG ELLSRYVAHM NAAAATTPTT
LLYTYHFNPA GKIDSVKLCL NDDFAAQRTI SYKTYNELGK VSKKRIGVTG TTAQLETFDY
SYGMNGLEGI NKSFVNGTGG SSNWFGQVIG FDKGFSARQY SGELSGSSWK TKGSVARALG
FGYDQMSRLV ESDFSQQNEG STTWTNSPVD FSSAFKYDDN TNLSSMVQYG MDGAVSRKVD
SLEMGFYANS NKLNYVKDHK NVSGGQNRDD FNELVSNTAT DFTYDQNSNQ TRDRNKGIDS
TWYNVLNLPE RVAVPGKGVV SFLYDADGNK LRKLVVDSTS TPVKRIETDY MGDLVYTNDT
LREVFYDEGR IRMVYKENRP PKFSWDYYIP DNAGNIRMVI ATESDTSKYV ATMEPEYAET
ENLLFSNIDN TRVPKPVGYP ADASNAPNNF VAKLNAQNGQ KIGPSLVLRV MAGDTVQVGV
KAFYKSGSSS SYTSPVNDLV TALLSAFSGV GVVDGIHKGS GAGSPISTMN AALYNEMKNN
DPSQNQPDKL KAFMNYAGFD DQFNMSDDNT GVLQVQNAPD AVQVLSTGKM VVKKTGFMYF
FVSNETGQDV YFDRLVVEHY GRLLEETHYY PYGGIMAGIS SKALKGDDYI ENRKLFGGKE
LNDKEFADGA GLKLADFGAR WYNALAGNWT TLDPKASEMQ AFSPYNYCLG NPVRYIDGNG
KKPTDIVYID IYGREVHRIK SDAEFRTFIQ FSYMAADPAK SNIGWIEVPM PGIIAEKGGM
ATTDDKYQQY DYLIAARTGY VNQAKNAGAL QLYTEGGNPI PKSELAQIPD LNPTLVKAMV
MEESTMGDRG ITDIMQSNVR GDWKTSHQLK QAYGIKKDEV MTPSISLWLG VRILMTKGFK
GGIKVDKGGK KTYTFQGYKK AVKNYNGGGN EFYTEQIEQL LKKVIEGNKS IPKKAIEWLS
RPPQLKIPEQ QKNEPILR
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