Gene Cpin_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_3174 
Symbol 
ID8359339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp3909338 
End bp3910267 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content55% 
IMG OID644965346 
ProductUbiA prenyltransferase 
Protein accessionYP_003122842 
Protein GI256422189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.694919 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.880565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCG CCTATTCCTT CAAACCCGTC CTGTTTGCAT GCAGGACCCT CCAGCGAGAG 
CTATACATAG CCTGGAAATT TATAGACAAC GACATCTGGG ATACCATACT ACCGTCCCTC
ATGATCTTCT TCACCGGCTG GATCTACCAT GGCCGATCAT GGGCCGAACT GCCGCTGCCA
TTCCTCACCT CCCTTTCTTA CGCGGTACTC TACATCTACA CCTTCTGCAT GGGCAACCAG
CTCGATGGGG TAGAAGAAGA CCGGCTCAAC AAGCCATACC GTCCGCTCGT AACGGGCCTG
GTAACCGTGC GCGAAACCTA CCGGCGGTTC TGGATCTACA ACATCCTCTA CGCCCTGTAC
GGACTACTGC TGGGCACTTT CTGGTACGCC ATCGCCTGGA TCATTGTATC CTGCTACCTC
AATCTTGGTG GCGGCAGCAA CCACTGGGCC ACCAAAAATC TCGTTGGAAT GACGCTGGGA
ACCTTCATTC TTTTCAACGT GCAATGGAGC ATTGCCCTGC CTGCGGACGC GCATATTGGC
ACCAATCTCG AAGTCTACTT CGCCCTCATG AGTGCCTGGG CGGGCTTCGC ACTGCCTATA
CAAGACCTGC GCGATATGGC CGGCGACCTC AAAGGAGGAC GTCGCACCTT GCCCATTGTT
GTAGGCGACA CAAGGGCGCG ATGGTACCTC TGTATCCACT ACCTGATCTT TCTACCCGCC
ACTTTTCTAT GCGCGATGCT CACCCAGGAT AGTCTGCACG ACATCTTCTC CGTAGCGGTG
GACCTGATCA TTTTCCTGAT CCAGCTCGTG GTCCACTGGA CGGTGGCCGT GCGACTGCTG
CTGTTCCGTT CACCCTCCGC CGACCACAAA ACCTACCACT GCTATGTGCT TTTGTTCGTG
GCTTCCATAC CGATGGCCTG TTTACTTTGA
 
Protein sequence
MSPAYSFKPV LFACRTLQRE LYIAWKFIDN DIWDTILPSL MIFFTGWIYH GRSWAELPLP 
FLTSLSYAVL YIYTFCMGNQ LDGVEEDRLN KPYRPLVTGL VTVRETYRRF WIYNILYALY
GLLLGTFWYA IAWIIVSCYL NLGGGSNHWA TKNLVGMTLG TFILFNVQWS IALPADAHIG
TNLEVYFALM SAWAGFALPI QDLRDMAGDL KGGRRTLPIV VGDTRARWYL CIHYLIFLPA
TFLCAMLTQD SLHDIFSVAV DLIIFLIQLV VHWTVAVRLL LFRSPSADHK TYHCYVLLFV
ASIPMACLL