Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_3174 |
Symbol | |
ID | 8359339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 3909338 |
End bp | 3910267 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644965346 |
Product | UbiA prenyltransferase |
Protein accession | YP_003122842 |
Protein GI | 256422189 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.694919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.880565 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACCCG CCTATTCCTT CAAACCCGTC CTGTTTGCAT GCAGGACCCT CCAGCGAGAG CTATACATAG CCTGGAAATT TATAGACAAC GACATCTGGG ATACCATACT ACCGTCCCTC ATGATCTTCT TCACCGGCTG GATCTACCAT GGCCGATCAT GGGCCGAACT GCCGCTGCCA TTCCTCACCT CCCTTTCTTA CGCGGTACTC TACATCTACA CCTTCTGCAT GGGCAACCAG CTCGATGGGG TAGAAGAAGA CCGGCTCAAC AAGCCATACC GTCCGCTCGT AACGGGCCTG GTAACCGTGC GCGAAACCTA CCGGCGGTTC TGGATCTACA ACATCCTCTA CGCCCTGTAC GGACTACTGC TGGGCACTTT CTGGTACGCC ATCGCCTGGA TCATTGTATC CTGCTACCTC AATCTTGGTG GCGGCAGCAA CCACTGGGCC ACCAAAAATC TCGTTGGAAT GACGCTGGGA ACCTTCATTC TTTTCAACGT GCAATGGAGC ATTGCCCTGC CTGCGGACGC GCATATTGGC ACCAATCTCG AAGTCTACTT CGCCCTCATG AGTGCCTGGG CGGGCTTCGC ACTGCCTATA CAAGACCTGC GCGATATGGC CGGCGACCTC AAAGGAGGAC GTCGCACCTT GCCCATTGTT GTAGGCGACA CAAGGGCGCG ATGGTACCTC TGTATCCACT ACCTGATCTT TCTACCCGCC ACTTTTCTAT GCGCGATGCT CACCCAGGAT AGTCTGCACG ACATCTTCTC CGTAGCGGTG GACCTGATCA TTTTCCTGAT CCAGCTCGTG GTCCACTGGA CGGTGGCCGT GCGACTGCTG CTGTTCCGTT CACCCTCCGC CGACCACAAA ACCTACCACT GCTATGTGCT TTTGTTCGTG GCTTCCATAC CGATGGCCTG TTTACTTTGA
|
Protein sequence | MSPAYSFKPV LFACRTLQRE LYIAWKFIDN DIWDTILPSL MIFFTGWIYH GRSWAELPLP FLTSLSYAVL YIYTFCMGNQ LDGVEEDRLN KPYRPLVTGL VTVRETYRRF WIYNILYALY GLLLGTFWYA IAWIIVSCYL NLGGGSNHWA TKNLVGMTLG TFILFNVQWS IALPADAHIG TNLEVYFALM SAWAGFALPI QDLRDMAGDL KGGRRTLPIV VGDTRARWYL CIHYLIFLPA TFLCAMLTQD SLHDIFSVAV DLIIFLIQLV VHWTVAVRLL LFRSPSADHK TYHCYVLLFV ASIPMACLL
|
| |