| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3170 |
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| Symbol | |
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| ID | 8359335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 3905802 |
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| End bp | 3906800 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965342 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003122838 |
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| Protein GI | 256422185 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.777646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AGGTTCCGCC CAACATGGAA CCGCACATTA GAGTTAGCAA CAAAATCCCT
TCTTCGCATG CACAGTACCA GGTAAGCCAT GCGGGAGCAG AGTTCGTAAC AGGCGATTTT
GGCTCTTTTC TCACCCAGGA GATAACTACC CCATTCTGGA GACTGGGCTG GCTGAACTTT
TTTATTAAAG AAGACAGCTA CTTATACCCT ACGACGCAGA CTGCTATGGT GGCGTTGTAT
GCTACCATTG ACGGCGACAT ACCCTGCAAG CTGGAAGGCT TTGGCGACCT GGTGCTGCAA
AACAGGCGGT ATGGGTTTTA CTACATTCCG CCGGAAGTGA AGAACGAAGC TTTTTTTCAG
GCAGGGGATT ACGATGCGGT GTATGTATCG TTCTCGCTCA CGTTCCTATC ACAGTTCATA
GACGAGAACC CCCGGTTTAA GGACCTGTAC ACCCGGCAGA ACGAACAGGT AAACAGCGGC
ATAGCGTTGC CAACCTACCC TATTACGCAG GTGGAGCTGG ATATTTTGAA TAAGATACGC
TATAGCCGGT ACAAGGGTAA GAGCCAGGAA CTGTTTATTC AGGCAAGGAT CAACGACCTG
CTGGTAAGCT ATTTTCAGGC GCTGGAAGGT GCGGGTAAGG AGGAAGTGGA TACTAACGAA
CTGGAACAAC GCATACAGGA TGTAGCGAAT TACATAACGC ATCATCTGCA CCAGTCCTTA
TCCATAGCGG ATCTGAGCAA AAAGGCCCGA CTGAACCTGG ACAAGTTTGA AAAAACGTTT
AAGCAGGTAA TGGGCAGCGC TCCGCAGAAG TTCATTGAAG ATACGCGTAT GCAGGAAGCA
GCCCGGTTGC TGCGTACAAC CGACATACCT ATTGCAGATG TGGCGTACAA GGTAGGCTAT
GCAGATCAGG GGTATTTTAC CAAAGTTTTC AAGCGCGTAT TTGGTGTTAC ACCACGTAAA
TACCGGCAGG ATAATTCTGA CGCTAACAAT AGCGTATAA
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| Protein sequence | MKFKVPPNME PHIRVSNKIP SSHAQYQVSH AGAEFVTGDF GSFLTQEITT PFWRLGWLNF
FIKEDSYLYP TTQTAMVALY ATIDGDIPCK LEGFGDLVLQ NRRYGFYYIP PEVKNEAFFQ
AGDYDAVYVS FSLTFLSQFI DENPRFKDLY TRQNEQVNSG IALPTYPITQ VELDILNKIR
YSRYKGKSQE LFIQARINDL LVSYFQALEG AGKEEVDTNE LEQRIQDVAN YITHHLHQSL
SIADLSKKAR LNLDKFEKTF KQVMGSAPQK FIEDTRMQEA ARLLRTTDIP IADVAYKVGY
ADQGYFTKVF KRVFGVTPRK YRQDNSDANN SV
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