| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3164 |
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| Symbol | |
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| ID | 8359329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3898600 |
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| End bp | 3901881 |
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| Gene Length | 3282 bp |
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| Protein Length | 1093 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644965336 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003122832 |
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| Protein GI | 256422179 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAAT TGCTTAAAAA CGGAAAGTTT TTTATATTCT TTCCTATTAT GTGCTATTTC
CTAAATAGTC CTCTCACTAT ATTAGGTCAA ACACCAGCAG TAGCAGAAAA CATACCAGTA
TCACTTTCTG CTGTCAATGC TCCGCTAATA ACAGTACTTA AGAGCATAGA AAAGCAAACA
GGCTTGCGCT TTAATTATAG CGGAGATTTG GACATCAAAC GGAGAGTTAC GATTGATCAG
AATAAGAAAC CCGTTTCCGA AGCTTTAAAA ACATTGTTTT TGGAAAAAGG ATTCTCCTAT
AAGTTCATAG ATAAGAATAT ATTTATTATT AAAAGTCAGG CTGGTGCTAC TGATAACAGT
TCTTCATCCC GTACCGACAG TACTTATCTT ATTAAAGGAC GGGTTAACGA TTCAAAAGGT
ATTGCAATCC CAGGAGTTAC GGTAATGATA AGAGGTACTG CAATTGGTAC GACTACCAAT
GAAAGTGGTG AATTTTCTTT GAATACTCAA ACGCCTCAAG GGACACTTCA TGTGAGTCAT
ACCGGTTATC GGGCTCAGGA TATGCAAATA TCGGCTGGCC ACACCATAAA TGTGGTATTG
TCGGAAGACG TTAATTTGTT AGAAGAAACC GTTGTTATTG CCTATGGTAC TACAACGAAA
AAATACAATA CAGGATCAAT TGGTACCATT AAAAGCGCAG TAATAGAAAA GCAACCAGTA
GCCAATGCAA TGCTAACCCT TCAGGGCAGG CTTGCAGGGG TAGTTGTTAC TCAAAATACA
GGCATGCCCG GATCTCGTGT CAATGTTCAA ATCAGGGGAA GGAATTCAAT ACAGAGCGGA
AATGAACCTT TATATGTGAT TGATGGCGTA CCTTTTAATT CTACACCAAT AAATTTGTTA
AGTGGGAGTG AAATTTTCTA CCAAAATCCG TTAAATAGCA TACCACCAAG TGATATAGAA
AGTATAGATA TCTTGAAGGA TGCAGATGCT ACCGCGATCT ATGGCAGTAG AGGCGCTAAT
GGAGTAGTAT TAGTTACAAC GAAGAAAGGT AAAACCGGAA AAACACAACT TGGTTTAAAT
TTATCTGCCG GATATGGGAA AGTAAGCAGA TTCCTAGACT ACATGAATAC CAAGGAGTAT
GTTGCCATGA GAAAGGAAGC ATTTGAAAAT GACGGTGTAG CACCTTCTGA TGCAACTGCG
TATGATTTTT TGGTTTGGGA TACTACAAGG AGTACCGACT GGCAACGTAA ACTAATAGGA
GGTACGTCTC AATACAGGGA TGCTCAACTG TCGCTTTCAG GTGGAAGTCA ACAAACTACT
TTTTTATTCA GTGGCAACTA CCATTACGAG ACAACTGTTT TTCCTGGTGA TTTTTCCGAC
AAGAGAATCG GAGCCCGTTT AAATGTAAAT CACAGTTCAA TTGACAACAG ATTTAAAGCA
GATATATCCG CTAGTTATTC CAATGACAAC AACAGGTTAA TAAGTCAGGA TCTTTCTTTT
GTTTCTTCAT TAATTCCTAA CCTCCCTGAT ACGCACACTC CGGACGGTAA ATTAATGTGG
TATTATAAAG GCTATAATTT CCAAAATCCC TATGCCTATC TCCTGAAGTC CTATTCTGCA
TTAACGGATA ATTTTATAAG CAATGCCAAT TTGAAATATT CCATTTATAA TGGATTATCT
GTTAAGGCGA ATTTGGGTTT TACTAACACT CAATTAAAGC AAACCAGCAC TAATCCTGCC
GCATCTCAGA ATCCTGACTA TACTGTAATC GCCACAGCAG ATTTTGGAAA CAATACAATA
AAAACATGGA ATGCTGAACC TCAAATAGAG TATGTTAACC GTTTGTTCGG TGGAAATATC
GAAGCACTGG TAGGAAGCAC TTTTCAAGAG TCGGTGATAA GTGGTAATAC AATAAATGCA
AGTGGTTACA ATGATGATGG TACAATTGGA ACAACCACAG GCGCCTCTAA TATTACCGCC
AGAACAAACT ACAGCCAGTA TCGGTTTGTT TCATTATTCG GAAGGCTAAA GTATATTTTG
AATGATAAGT ATATTGTCAA CTTTAATGGA AGAAGAGACG GTTCCACGCG ATTTGGACCT
GGTAAAAAAT ATGGAAACTT TGCATCGGCA GGTCTTGCTT GGTTATTCTT CAATGAGGCT
TTCGTAAAAG ACAACTTGTC CTTCCTGTCT TATGGAAAGT TACGAGGCAG TTATGGATCG
TCTGGAAACG ACAAGATAGG CGATTATCAA TATTTAGATC TCTCCGATGG CACGATCTAC
CCGTATGGAG GTGTTTCAGC ACTTATGCCT ACAAAAATCT TTAATTCAGA CTATGCTTGG
GAGGTGAATA AAAAACTTGA GTTTGGGCTC GAACTCGGAT TCCTAAATAA CGCCATCTTA
TTCAATGCTA ATTATTTTAA AAACAAGAGT GACAATCAGC TAATCAACTA TACATTACCT
ACACAAACTG GCTTTTCTCT TGTGGTCCGT AACTTTCCTG CGGTTGTTAA GAACACCGGA
GTTGAATTTG AGTTGAAGAC AAATAATGTA GCCCGAAAGG ATTGGTCTTG GAATTCTTCT
GTAAACCTCA GTGTTATCAA TAATAAATTA GTCTCCTTTC CTGGTATAGA AAATACCAGC
TATGCTGCAT TTTATACAAT AGGTCAGCCA TTAAACGCTC GAAAAGTATA TAAGAACACC
GGTATAGATC CTAATACAGG CATTTATACA TATTTAGATG TAAACGGAGA TGGATTCATA
TCATCGCCTA CTGACCAACA GGTTACTAAA AGTTTAGATC CTAAGTACTA CGGAGGTGTT
TTGAATAATA TCCGATTTAA AAATTTCGAA GTTGATTTCC TTTTTCAGTT CGTAAAACAG
GAAGGGAATA ACTATTTAAA TCCAATATTA AGTACTAATC CACCAGGTGC TATAATGAAT
CAGCCTGTCG ATGTGCTCAA TAGATGGCAA ACGGGTAAGA CGGGAGGAGA ATTTCAAAAG
TATACCGCGT CAACTGGAGA TGCTTATGAA GCTTGGAACA AGCTAGGTAA TTCTGAAGCC
GCGATAACTG ACGCATCTTT CATAAGACTA AAGAACCTTT CTGTATCATA TAGTATACCT
AGTCAACTGT TAAGTAGGTA TAAAATAGCA CTGCTTAGGA TATATATTCA GGGCCAGAAT
CTATTAACAA TTACTAACTA CAAAGGATTA GATCCTGAAA CTCAGATTTC CGGATTACCC
CCATTGCGAA TGTTGACAGG CGGTATTCAA ATAACTTTAT AA
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| Protein sequence | MLKLLKNGKF FIFFPIMCYF LNSPLTILGQ TPAVAENIPV SLSAVNAPLI TVLKSIEKQT
GLRFNYSGDL DIKRRVTIDQ NKKPVSEALK TLFLEKGFSY KFIDKNIFII KSQAGATDNS
SSSRTDSTYL IKGRVNDSKG IAIPGVTVMI RGTAIGTTTN ESGEFSLNTQ TPQGTLHVSH
TGYRAQDMQI SAGHTINVVL SEDVNLLEET VVIAYGTTTK KYNTGSIGTI KSAVIEKQPV
ANAMLTLQGR LAGVVVTQNT GMPGSRVNVQ IRGRNSIQSG NEPLYVIDGV PFNSTPINLL
SGSEIFYQNP LNSIPPSDIE SIDILKDADA TAIYGSRGAN GVVLVTTKKG KTGKTQLGLN
LSAGYGKVSR FLDYMNTKEY VAMRKEAFEN DGVAPSDATA YDFLVWDTTR STDWQRKLIG
GTSQYRDAQL SLSGGSQQTT FLFSGNYHYE TTVFPGDFSD KRIGARLNVN HSSIDNRFKA
DISASYSNDN NRLISQDLSF VSSLIPNLPD THTPDGKLMW YYKGYNFQNP YAYLLKSYSA
LTDNFISNAN LKYSIYNGLS VKANLGFTNT QLKQTSTNPA ASQNPDYTVI ATADFGNNTI
KTWNAEPQIE YVNRLFGGNI EALVGSTFQE SVISGNTINA SGYNDDGTIG TTTGASNITA
RTNYSQYRFV SLFGRLKYIL NDKYIVNFNG RRDGSTRFGP GKKYGNFASA GLAWLFFNEA
FVKDNLSFLS YGKLRGSYGS SGNDKIGDYQ YLDLSDGTIY PYGGVSALMP TKIFNSDYAW
EVNKKLEFGL ELGFLNNAIL FNANYFKNKS DNQLINYTLP TQTGFSLVVR NFPAVVKNTG
VEFELKTNNV ARKDWSWNSS VNLSVINNKL VSFPGIENTS YAAFYTIGQP LNARKVYKNT
GIDPNTGIYT YLDVNGDGFI SSPTDQQVTK SLDPKYYGGV LNNIRFKNFE VDFLFQFVKQ
EGNNYLNPIL STNPPGAIMN QPVDVLNRWQ TGKTGGEFQK YTASTGDAYE AWNKLGNSEA
AITDASFIRL KNLSVSYSIP SQLLSRYKIA LLRIYIQGQN LLTITNYKGL DPETQISGLP
PLRMLTGGIQ ITL
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